Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC116096.1-201ENST00000566804 2314 ntBASIC2.97□□□□□ -1.93
CCDC112Q8NEF3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.96□□□□□ -1.93
CCDC112Q8NEF3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.96□□□□□ -1.93
CCDC112Q8NEF3 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 HMGN2P35-201ENST00000412164 270 ntBASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 RAP1BP1-201ENST00000412709 553 ntBASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 AL160175.1-201ENST00000428124 247 ntBASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 RPS7P2-201ENST00000435134 607 ntBASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 RABEPKP1-201ENST00000440529 1026 ntBASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 ELOCP13-201ENST00000443934 329 ntBASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 RPL34P26-201ENST00000445636 354 ntBASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 HMGB1P15-201ENST00000453854 435 ntBASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 AC126182.1-201ENST00000478134 357 ntBASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 AC083906.5-201ENST00000503722 328 ntBASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 RPL23AP88-201ENST00000605759 454 ntBASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 AL121594.5-201ENST00000631724 573 ntBASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
CCDC112Q8NEF3 AC109315.1-201ENST00000584143 1347 ntBASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 MIR142-201ENST00000384835 87 ntBASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 RNU6-564P-201ENST00000410983 104 ntBASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 RFESDP1-201ENST00000422350 461 ntBASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 HMGB1P48-201ENST00000446155 598 ntBASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 NPM1P13-201ENST00000452663 865 ntBASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 RPS24P6-201ENST00000452670 400 ntBASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 RPL23AP31-201ENST00000456160 467 ntBASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 SYPL1P1-201ENST00000473622 768 ntBASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 AC087879.1-201ENST00000474343 374 ntBASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 AC107398.1-201ENST00000486904 505 ntBASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 AC027309.2-201ENST00000520566 192 ntBASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 AC123904.3-201ENST00000547218 814 ntBASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 TPMTP1-201ENST00000592307 737 ntBASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 AC020923.1-201ENST00000624021 917 ntBASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 AC090897.3-201ENST00000636973 1157 ntBASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC112Q8NEF3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 AC005002.1-201ENST00000447458 540 ntBASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 AC010374.2-201ENST00000512933 535 ntBASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 SCGB1D5P-201ENST00000515134 247 ntBASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 AC026801.2-201ENST00000515352 425 ntBASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 RNA5SP402-201ENST00000517148 110 ntBASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 CIR1P1-201ENST00000524055 1133 ntBASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 AL049870.4-201ENST00000555741 486 ntBASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 AC091057.2-201ENST00000602594 792 ntBASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 AC107905.1-201ENST00000616204 426 ntBASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 U73479.1-201ENST00000618062 168 ntBASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 AC007998.5-201ENST00000622938 237 ntBASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC112Q8NEF3 PABPC1P7-201ENST00000413177 1513 ntBASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 RNVU1-3-201ENST00000364313 161 ntBASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 RNU6-1181P-201ENST00000384191 106 ntBASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 MIR1289-1-201ENST00000408836 144 ntBASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 RNU6-1077P-201ENST00000410506 102 ntBASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 EEF1A1P41-201ENST00000414667 207 ntBASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 RPS20P5-201ENST00000434808 360 ntBASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 CR769767.1-201ENST00000436337 346 ntBASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 RPS12P2-201ENST00000439728 269 ntBASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 AC010285.1-201ENST00000470580 392 ntBASIC2.93□□□□□ -1.94
CCDC112Q8NEF3 AC104689.1-201ENST00000473356 768 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms