Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC171Q6TFL3 MIR3690-201ENST00000580266 75 ntBASIC2.93□□□□□ -1.94
CCDC171Q6TFL3 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC171Q6TFL3 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC171Q6TFL3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 AC002546.1-201ENST00000588041 2504 ntBASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 AC016717.2-201ENST00000609089 5141 ntBASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 RNVU1-3-201ENST00000364313 161 ntBASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 MIR153-1-201ENST00000384914 90 ntBASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 RNA5SP508-201ENST00000411327 119 ntBASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 ATG3P1-201ENST00000419507 911 ntBASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 AC098826.1-201ENST00000433943 471 ntBASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 AC104389.3-201ENST00000445629 235 ntBASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 HSPE1P6-201ENST00000479457 291 ntBASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 RN7SKP82-201ENST00000516786 223 ntBASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 AL512310.1-201ENST00000548639 172 ntBASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 DUXAP3-201ENST00000603616 594 ntBASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 AL137847.3-201ENST00000611521 109 ntBASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC171Q6TFL3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC171Q6TFL3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CCDC171Q6TFL3 AL136520.1-201ENST00000600311 1322 ntBASIC2.91□□□□□ -1.94
CCDC171Q6TFL3 XGY1-201ENST00000381172 446 ntBASIC2.91□□□□□ -1.94
CCDC171Q6TFL3 SNORA41-201ENST00000384675 132 ntBASIC2.91□□□□□ -1.94
CCDC171Q6TFL3 FAT1P1-201ENST00000406588 507 ntBASIC2.91□□□□□ -1.94
CCDC171Q6TFL3 PTP4A1P3-201ENST00000433661 420 ntBASIC2.91□□□□□ -1.94
CCDC171Q6TFL3 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC171Q6TFL3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC171Q6TFL3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC171Q6TFL3 AADACP1-206ENST00000561502 1193 ntBASIC2.91□□□□□ -1.94
CCDC171Q6TFL3 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CCDC171Q6TFL3 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.91□□□□□ -1.94
CCDC171Q6TFL3 AC103810.6-201ENST00000606708 136 ntBASIC2.91□□□□□ -1.94
CCDC171Q6TFL3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC171Q6TFL3 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC171Q6TFL3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.94
CCDC171Q6TFL3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CCDC171Q6TFL3 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC2.9□□□□□ -1.95
CCDC171Q6TFL3 SNORD56.5-201ENST00000364281 72 ntBASIC2.9□□□□□ -1.95
CCDC171Q6TFL3 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CCDC171Q6TFL3 ATF1P1-201ENST00000406040 927 ntBASIC2.9□□□□□ -1.95
CCDC171Q6TFL3 AC005517.2-201ENST00000424673 553 ntBASIC2.9□□□□□ -1.95
CCDC171Q6TFL3 HMGB1P45-201ENST00000435986 653 ntBASIC2.9□□□□□ -1.95
CCDC171Q6TFL3 CALM1P2-201ENST00000452941 448 ntBASIC2.9□□□□□ -1.95
CCDC171Q6TFL3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.9□□□□□ -1.95
CCDC171Q6TFL3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC171Q6TFL3 AC015849.6-201ENST00000605454 474 ntBASIC2.9□□□□□ -1.95
CCDC171Q6TFL3 AC116312.1-201ENST00000606841 314 ntBASIC2.9□□□□□ -1.95
CCDC171Q6TFL3 AC067747.1-201ENST00000608026 250 ntBASIC2.9□□□□□ -1.95
CCDC171Q6TFL3 AC019131.2-201ENST00000609071 870 ntBASIC2.9□□□□□ -1.95
CCDC171Q6TFL3 CYP3A51P-201ENST00000633513 256 ntBASIC2.9□□□□□ -1.95
CCDC171Q6TFL3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC171Q6TFL3 AL512283.1-201ENST00000606756 1384 ntBASIC2.89□□□□□ -1.95
CCDC171Q6TFL3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.89□□□□□ -1.95
CCDC171Q6TFL3 MIR21-201ENST00000362134 72 ntBASIC2.89□□□□□ -1.95
CCDC171Q6TFL3 RNU6-600P-201ENST00000362524 99 ntBASIC2.89□□□□□ -1.95
CCDC171Q6TFL3 MT-TP-201ENST00000387461 68 ntBASIC2.89□□□□□ -1.95
CCDC171Q6TFL3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC171Q6TFL3 MTCO1P39-201ENST00000426148 480 ntBASIC2.89□□□□□ -1.95
CCDC171Q6TFL3 AC129850.1-201ENST00000436203 508 ntBASIC2.89□□□□□ -1.95
CCDC171Q6TFL3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC171Q6TFL3 UBBP3-201ENST00000445497 241 ntBASIC2.89□□□□□ -1.95
CCDC171Q6TFL3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC171Q6TFL3 AC128713.1-201ENST00000471495 306 ntBASIC2.89□□□□□ -1.95
CCDC171Q6TFL3 RN7SKP244-201ENST00000516513 307 ntBASIC2.89□□□□□ -1.95
CCDC171Q6TFL3 AP003467.2-201ENST00000520175 319 ntBASIC2.89□□□□□ -1.95
CCDC171Q6TFL3 AC112503.1-201ENST00000608436 391 ntBASIC2.89□□□□□ -1.95
CCDC171Q6TFL3 AC107294.1-201ENST00000609524 467 ntBASIC2.89□□□□□ -1.95
CCDC171Q6TFL3 AC006023.2-201ENST00000609916 167 ntBASIC2.89□□□□□ -1.95
CCDC171Q6TFL3 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC171Q6TFL3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC171Q6TFL3 MIR1291-201ENST00000627649 87 ntBASIC2.89□□□□□ -1.95
CCDC171Q6TFL3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC171Q6TFL3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC171Q6TFL3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
CCDC171Q6TFL3 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC171Q6TFL3 SNORA67.4-201ENST00000384688 142 ntBASIC2.88□□□□□ -1.95
CCDC171Q6TFL3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC171Q6TFL3 RPL21P112-201ENST00000434403 463 ntBASIC2.88□□□□□ -1.95
CCDC171Q6TFL3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC171Q6TFL3 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC171Q6TFL3 AP000852.1-201ENST00000472460 573 ntBASIC2.88□□□□□ -1.95
CCDC171Q6TFL3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC171Q6TFL3 AC234781.5-201ENST00000508429 271 ntBASIC2.88□□□□□ -1.95
CCDC171Q6TFL3 AC093755.1-201ENST00000512950 1023 ntBASIC2.88□□□□□ -1.95
CCDC171Q6TFL3 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC171Q6TFL3 AP002812.4-201ENST00000532139 286 ntBASIC2.88□□□□□ -1.95
CCDC171Q6TFL3 AC234775.3-201ENST00000564612 656 ntBASIC2.88□□□□□ -1.95
CCDC171Q6TFL3 DUXAP4-201ENST00000603046 613 ntBASIC2.88□□□□□ -1.95
CCDC171Q6TFL3 AL645944.1-201ENST00000603857 493 ntBASIC2.88□□□□□ -1.95
CCDC171Q6TFL3 CTSLP2-204ENST00000629029 392 ntBASIC2.88□□□□□ -1.95
CCDC171Q6TFL3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms