Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 RAC1P3-201ENST00000416129 580 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 PSMD10P3-201ENST00000437000 448 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 AC006466.1-201ENST00000438721 289 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 RPL26P6-201ENST00000440913 438 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 MTND6P13-201ENST00000443510 523 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 KNOP1P3-201ENST00000446933 426 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 TPT1P14-201ENST00000448018 505 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 AL162151.2-201ENST00000448875 158 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 ACTR3P3-201ENST00000480448 893 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 VN1R104P-201ENST00000505115 1009 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 AC002456.2-201ENST00000509356 380 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 RNA5SP154-201ENST00000516193 111 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 SNORA31.22-201ENST00000517204 135 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 AC090151.1-201ENST00000520784 730 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 AP003181.2-201ENST00000528941 181 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 SYF2P1-201ENST00000550658 413 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 RPL21P5-201ENST00000554662 472 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 OR4T1P-201ENST00000554933 911 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 AL356432.3-201ENST00000568952 465 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 AC087683.1-201ENST00000591187 441 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 AC091304.9-201ENST00000612091 226 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 AC105074.1-201ENST00000623380 3095 ntBASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PPP4R4Q6NUP7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 RNA5SP52-201ENST00000362448 134 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 AL357515.1-201ENST00000402967 542 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 AL663109.1-201ENST00000411498 844 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 RPS3AP3-201ENST00000411933 242 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 AC007899.1-201ENST00000412776 775 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 AC233728.2-201ENST00000425348 757 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 SKP1P1-201ENST00000438081 489 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 AL138878.2-201ENST00000440581 1241 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 AC114495.1-201ENST00000441274 436 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 AC011753.3-201ENST00000443436 406 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 RPL17P49-201ENST00000443728 411 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 PDSS1P2-201ENST00000449397 678 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 AC091685.2-201ENST00000454924 864 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 RPS3AP41-201ENST00000462701 778 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 AC108860.1-201ENST00000484521 383 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 LARP1BP2-201ENST00000486594 519 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 RPS3AP50-201ENST00000487064 803 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 NDUFB4P9-201ENST00000511646 388 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 AL034351.1-201ENST00000605288 668 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 AC098614.4-201ENST00000607601 462 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 AL138713.1-201ENST00000624026 2130 ntBASIC4.45□□□□□ -1.7
PPP4R4Q6NUP7 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PPP4R4Q6NUP7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PPP4R4Q6NUP7 AF127577.6-201ENST00000623352 2191 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms