Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AP004371.1-201ENST00000525240 214 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 AC022882.1-201ENST00000532142 501 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 AL391840.1-201ENST00000571144 367 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 MIR3913-1-201ENST00000577744 102 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 MIR3118-1-201ENST00000581787 76 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 AL020997.2-201ENST00000602607 184 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 AL021997.1-201ENST00000605757 193 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 AC004492.1-201ENST00000607036 742 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 AC007038.2-201ENST00000608095 740 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 AC095031.1-201ENST00000623685 672 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 AC112204.3-201ENST00000623822 332 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 U3.53-201ENST00000628922 216 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 OR14L1P-202ENST00000641545 3009 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 AC004925.1-201ENST00000624256 2706 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 EOGT-210ENST00000615922 1931 ntBASIC5.29□□□□□ -1.56
CCDC144BQ3MJ40 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 RNU6-335P-201ENST00000364563 113 ntBASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 SNORD3H-201ENST00000384486 214 ntBASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 RAD23BP2-201ENST00000416003 1207 ntBASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 ISCA1P6-201ENST00000427740 390 ntBASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 AC010493.1-201ENST00000513479 292 ntBASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 HMGB1P19-201ENST00000517578 577 ntBASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 AC134698.5-201ENST00000519444 336 ntBASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 MIR3939-201ENST00000582614 106 ntBASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 VN1R79P-201ENST00000593540 513 ntBASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 AC098614.4-201ENST00000607601 462 ntBASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 AL161734.1-201ENST00000609720 557 ntBASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 AP005019.3-201ENST00000620418 560 ntBASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 AC091953.2-201ENST00000623979 160 ntBASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CCDC144BQ3MJ40 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 AC027514.1-201ENST00000588561 1603 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 RNU1-94P-201ENST00000362627 173 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 Y_RNA.126-201ENST00000363382 111 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 RNU6-432P-201ENST00000384196 109 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 MIR19A-201ENST00000384878 82 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 RNU6-754P-201ENST00000391166 107 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 HDGFP1-201ENST00000405943 252 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 AC009237.10-201ENST00000414112 510 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 AC104651.1-201ENST00000427559 735 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 MTND3P21-201ENST00000433774 331 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 MTND1P12-201ENST00000455231 147 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 S100A11P1-201ENST00000477525 312 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 RPL9P33-201ENST00000484311 566 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 AC091133.4-201ENST00000511142 308 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 AC007016.1-201ENST00000512110 244 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 Vault.3-201ENST00000516676 95 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 RNU6-798P-201ENST00000516912 103 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 AP000857.1-201ENST00000532151 543 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 AC006960.3-201ENST00000561845 705 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 SNRPGP15-201ENST00000600149 222 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 AC012409.3-201ENST00000611343 981 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 AL603758.1-201ENST00000618654 241 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 MIR4275-201ENST00000636486 87 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 ZFRP1-201ENST00000457579 2970 ntBASIC5.27□□□□□ -1.57
CCDC144BQ3MJ40 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms