Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.81□□□□□ -1.8
PTCH1Q13635 AC006270.2-201ENST00000578523 652 ntBASIC3.81□□□□□ -1.8
PTCH1Q13635 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.81□□□□□ -1.8
PTCH1Q13635 AC018926.3-201ENST00000618841 406 ntBASIC3.81□□□□□ -1.8
PTCH1Q13635 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.81□□□□□ -1.8
PTCH1Q13635 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.81□□□□□ -1.8
PTCH1Q13635 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.81□□□□□ -1.8
PTCH1Q13635 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.81□□□□□ -1.8
PTCH1Q13635 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.81□□□□□ -1.8
PTCH1Q13635 AC008725.1-201ENST00000605123 2263 ntBASIC3.81□□□□□ -1.8
PTCH1Q13635 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTCH1Q13635 RPL31P1-201ENST00000398116 372 ntBASIC3.8□□□□□ -1.8
PTCH1Q13635 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.8□□□□□ -1.8
PTCH1Q13635 AC073310.1-201ENST00000423226 1033 ntBASIC3.8□□□□□ -1.8
PTCH1Q13635 AL049610.1-201ENST00000423374 372 ntBASIC3.8□□□□□ -1.8
PTCH1Q13635 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.8□□□□□ -1.8
PTCH1Q13635 AC093422.3-201ENST00000428506 305 ntBASIC3.8□□□□□ -1.8
PTCH1Q13635 HMGN2P21-201ENST00000447764 270 ntBASIC3.8□□□□□ -1.8
PTCH1Q13635 AC008280.2-201ENST00000455473 307 ntBASIC3.8□□□□□ -1.8
PTCH1Q13635 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.8□□□□□ -1.8
PTCH1Q13635 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
PTCH1Q13635 AC008885.2-201ENST00000509506 930 ntBASIC3.8□□□□□ -1.8
PTCH1Q13635 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.8□□□□□ -1.8
PTCH1Q13635 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.8□□□□□ -1.8
PTCH1Q13635 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.8□□□□□ -1.8
PTCH1Q13635 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.8□□□□□ -1.8
PTCH1Q13635 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.8□□□□□ -1.8
PTCH1Q13635 AC091488.1-201ENST00000604239 660 ntBASIC3.8□□□□□ -1.8
PTCH1Q13635 AC018754.1-201ENST00000607486 925 ntBASIC3.8□□□□□ -1.8
PTCH1Q13635 AC010338.1-201ENST00000621823 717 ntBASIC3.8□□□□□ -1.8
PTCH1Q13635 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.8□□□□□ -1.8
PTCH1Q13635 AC241585.2-209ENST00000638217 143 ntBASIC3.8□□□□□ -1.8
PTCH1Q13635 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTCH1Q13635 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTCH1Q13635 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
PTCH1Q13635 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTCH1Q13635 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.79□□□□□ -1.8
PTCH1Q13635 RNU6-1339P-201ENST00000363574 91 ntBASIC3.79□□□□□ -1.8
PTCH1Q13635 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTCH1Q13635 MIR512-1-201ENST00000384913 84 ntBASIC3.79□□□□□ -1.8
PTCH1Q13635 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PTCH1Q13635 RPS4XP7-201ENST00000406274 780 ntBASIC3.79□□□□□ -1.8
PTCH1Q13635 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.79□□□□□ -1.8
PTCH1Q13635 MORF4L1P7-201ENST00000426038 703 ntBASIC3.79□□□□□ -1.8
PTCH1Q13635 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.79□□□□□ -1.8
PTCH1Q13635 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTCH1Q13635 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.79□□□□□ -1.8
PTCH1Q13635 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.79□□□□□ -1.8
PTCH1Q13635 AC108210.2-201ENST00000503681 201 ntBASIC3.79□□□□□ -1.8
PTCH1Q13635 MTCO1P30-201ENST00000515244 580 ntBASIC3.79□□□□□ -1.8
PTCH1Q13635 RNU2-58P-201ENST00000516403 183 ntBASIC3.79□□□□□ -1.8
PTCH1Q13635 AC104115.2-201ENST00000523026 687 ntBASIC3.79□□□□□ -1.8
PTCH1Q13635 FAM60DP-201ENST00000524174 632 ntBASIC3.79□□□□□ -1.8
PTCH1Q13635 CTSLP2-204ENST00000629029 392 ntBASIC3.79□□□□□ -1.8
PTCH1Q13635 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTCH1Q13635 AC016716.1-201ENST00000265882 708 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 MIR26A1-201ENST00000362205 77 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTCH1Q13635 EIF5P1-201ENST00000400019 1231 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 AL355379.1-201ENST00000405542 640 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 UBE2V1P15-201ENST00000407776 448 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 RPL7P10-201ENST00000417407 739 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 AC112220.1-201ENST00000434628 355 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.78□□□□□ -1.8
PTCH1Q13635 AL590639.1-201ENST00000456484 337 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 AP004242.1-201ENST00000533701 349 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.78□□□□□ -1.8
PTCH1Q13635 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.78□□□□□ -1.8
PTCH1Q13635 AL731537.2-201ENST00000561565 951 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.78□□□□□ -1.8
PTCH1Q13635 AC003001.2-201ENST00000616294 831 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.78□□□□□ -1.8
PTCH1Q13635 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.78□□□□□ -1.8
PTCH1Q13635 AP003400.6-201ENST00000624698 740 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PTCH1Q13635 MTND4P21-201ENST00000453886 1357 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
PTCH1Q13635 MTCO1P9-201ENST00000505577 1534 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTCH1Q13635 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.78□□□□□ -1.8
PTCH1Q13635 MIR518C-201ENST00000384822 101 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.78□□□□□ -1.8
PTCH1Q13635 AL138799.3-201ENST00000438968 350 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 Z77249.1-201ENST00000444622 1175 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.78□□□□□ -1.8
PTCH1Q13635 AL590399.6-201ENST00000446396 307 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTCH1Q13635 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.78□□□□□ -1.8
PTCH1Q13635 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.78□□□□□ -1.8
PTCH1Q13635 AC096725.1-201ENST00000514266 313 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 RN7SKP43-201ENST00000516173 320 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 MTND2P7-201ENST00000521337 640 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.78□□□□□ -1.8
PTCH1Q13635 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.78□□□□□ -1.8
PTCH1Q13635 AC015712.3-201ENST00000559380 164 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 KATNBL1P5-201ENST00000605015 517 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 AC073569.3-201ENST00000619055 682 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 AC025034.2-201ENST00000623264 286 ntBASIC3.78□□□□□ -1.8
PTCH1Q13635 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
PTCH1Q13635 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms