Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 TRAV37-201ENST00000553906 342 ntBASIC3.47□□□□□ -1.85
SRP54P61011 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.47□□□□□ -1.85
SRP54P61011 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.47□□□□□ -1.85
SRP54P61011 LARP7P2-201ENST00000575306 125 ntBASIC3.47□□□□□ -1.85
SRP54P61011 MIR4425-201ENST00000580572 84 ntBASIC3.47□□□□□ -1.85
SRP54P61011 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.47□□□□□ -1.85
SRP54P61011 KLKP1-201ENST00000595979 403 ntBASIC3.47□□□□□ -1.85
SRP54P61011 VIS1.1-201ENST00000610517 203 ntBASIC3.47□□□□□ -1.85
SRP54P61011 AC024257.5-201ENST00000612739 531 ntBASIC3.47□□□□□ -1.85
SRP54P61011 AL109620.1-201ENST00000618738 1197 ntBASIC3.47□□□□□ -1.85
SRP54P61011 AC091925.2-201ENST00000625059 256 ntBASIC3.47□□□□□ -1.85
SRP54P61011 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SRP54P61011 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
SRP54P61011 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.47□□□□□ -1.85
SRP54P61011 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SRP54P61011 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.47□□□□□ -1.85
SRP54P61011 AC107982.1-201ENST00000507171 1300 ntBASIC3.46□□□□□ -1.85
SRP54P61011 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SRP54P61011 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.46□□□□□ -1.86
SRP54P61011 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SRP54P61011 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
SRP54P61011 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SRP54P61011 FRG1CP-201ENST00000358464 769 ntBASIC3.46□□□□□ -1.86
SRP54P61011 RNU6-50P-201ENST00000362356 103 ntBASIC3.46□□□□□ -1.86
SRP54P61011 RNU5D-1-201ENST00000363299 116 ntBASIC3.46□□□□□ -1.86
SRP54P61011 RNA5SP267-201ENST00000364893 126 ntBASIC3.46□□□□□ -1.86
SRP54P61011 DEFB109C-201ENST00000382575 264 ntBASIC3.46□□□□□ -1.86
SRP54P61011 DEFB109B-201ENST00000382656 264 ntBASIC3.46□□□□□ -1.86
SRP54P61011 SNORD17-201ENST00000390930 237 ntBASIC3.46□□□□□ -1.86
SRP54P61011 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SRP54P61011 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SRP54P61011 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.46□□□□□ -1.86
SRP54P61011 RN7SKP53-201ENST00000411337 315 ntBASIC3.46□□□□□ -1.86
SRP54P61011 VN1R51P-201ENST00000411675 945 ntBASIC3.46□□□□□ -1.86
SRP54P61011 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.46□□□□□ -1.86
SRP54P61011 AL158156.1-201ENST00000422509 473 ntBASIC3.46□□□□□ -1.86
SRP54P61011 RPL7P44-201ENST00000424827 742 ntBASIC3.46□□□□□ -1.86
SRP54P61011 AL590103.1-201ENST00000434488 307 ntBASIC3.46□□□□□ -1.86
SRP54P61011 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.46□□□□□ -1.86
SRP54P61011 RPL23AP74-201ENST00000437246 471 ntBASIC3.46□□□□□ -1.86
SRP54P61011 SETP5-201ENST00000437270 562 ntBASIC3.46□□□□□ -1.86
SRP54P61011 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.46□□□□□ -1.86
SRP54P61011 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.46□□□□□ -1.86
SRP54P61011 USP9YP34-201ENST00000453983 808 ntBASIC3.46□□□□□ -1.86
SRP54P61011 HSPD1P15-201ENST00000505573 1122 ntBASIC3.46□□□□□ -1.86
SRP54P61011 AC096571.1-202ENST00000506634 735 ntBASIC3.46□□□□□ -1.86
SRP54P61011 AC113347.3-201ENST00000509113 148 ntBASIC3.46□□□□□ -1.86
SRP54P61011 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.46□□□□□ -1.86
SRP54P61011 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.46□□□□□ -1.86
SRP54P61011 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.46□□□□□ -1.86
SRP54P61011 SNORA19.3-201ENST00000516165 130 ntBASIC3.46□□□□□ -1.86
SRP54P61011 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.46□□□□□ -1.86
SRP54P61011 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.46□□□□□ -1.86
SRP54P61011 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.46□□□□□ -1.86
SRP54P61011 AC011611.1-201ENST00000552179 197 ntBASIC3.46□□□□□ -1.86
SRP54P61011 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.46□□□□□ -1.86
SRP54P61011 TMF1P1-201ENST00000576058 373 ntBASIC3.46□□□□□ -1.86
SRP54P61011 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.46□□□□□ -1.86
SRP54P61011 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.46□□□□□ -1.86
SRP54P61011 AC245036.5-201ENST00000596330 847 ntBASIC3.46□□□□□ -1.86
SRP54P61011 AL161756.2-201ENST00000604597 246 ntBASIC3.46□□□□□ -1.86
SRP54P61011 AC097504.2-201ENST00000608088 454 ntBASIC3.46□□□□□ -1.86
SRP54P61011 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.46□□□□□ -1.86
SRP54P61011 AL590240.3-201ENST00000621416 943 ntBASIC3.46□□□□□ -1.86
SRP54P61011 AC073348.1-201ENST00000623002 331 ntBASIC3.46□□□□□ -1.86
SRP54P61011 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.46□□□□□ -1.86
SRP54P61011 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SRP54P61011 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SRP54P61011 MTND4P34-201ENST00000572715 1371 ntBASIC3.46□□□□□ -1.86
SRP54P61011 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
SRP54P61011 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SRP54P61011 AL645568.2-201ENST00000432815 1337 ntBASIC3.45□□□□□ -1.86
SRP54P61011 AC073346.2-201ENST00000624724 2058 ntBASIC3.45□□□□□ -1.86
SRP54P61011 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SRP54P61011 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SRP54P61011 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SRP54P61011 RNU1-33P-201ENST00000364249 162 ntBASIC3.45□□□□□ -1.86
SRP54P61011 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SRP54P61011 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SRP54P61011 MIR591-201ENST00000385290 95 ntBASIC3.45□□□□□ -1.86
SRP54P61011 SNORA40.2-201ENST00000390847 128 ntBASIC3.45□□□□□ -1.86
SRP54P61011 SNORA48.8-201ENST00000391324 134 ntBASIC3.45□□□□□ -1.86
SRP54P61011 CYCSP45-201ENST00000402289 315 ntBASIC3.45□□□□□ -1.86
SRP54P61011 U3.39-201ENST00000408569 239 ntBASIC3.45□□□□□ -1.86
SRP54P61011 RNU2-15P-201ENST00000410692 191 ntBASIC3.45□□□□□ -1.86
SRP54P61011 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SRP54P61011 OR1AA1P-201ENST00000419597 916 ntBASIC3.45□□□□□ -1.86
SRP54P61011 MRPS36P1-201ENST00000421291 307 ntBASIC3.45□□□□□ -1.86
SRP54P61011 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.45□□□□□ -1.86
SRP54P61011 OSTCP5-201ENST00000425293 453 ntBASIC3.45□□□□□ -1.86
SRP54P61011 DUTP6-201ENST00000425573 462 ntBASIC3.45□□□□□ -1.86
SRP54P61011 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.45□□□□□ -1.86
SRP54P61011 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.45□□□□□ -1.86
SRP54P61011 RPL23AP83-201ENST00000434984 473 ntBASIC3.45□□□□□ -1.86
SRP54P61011 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.45□□□□□ -1.86
SRP54P61011 RPS3AP12-201ENST00000443616 753 ntBASIC3.45□□□□□ -1.86
SRP54P61011 RFC5P1-201ENST00000454419 874 ntBASIC3.45□□□□□ -1.86
SRP54P61011 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.45□□□□□ -1.86
SRP54P61011 RPS4XP10-201ENST00000465034 731 ntBASIC3.45□□□□□ -1.86
SRP54P61011 AC108734.3-201ENST00000481241 1165 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms