Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 uc_338.25-201ENST00000613756 156 ntBASIC3.53□□□□□ -1.84
PEX3P56589 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.53□□□□□ -1.84
PEX3P56589 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PEX3P56589 AC091903.1-201ENST00000624322 454 ntBASIC3.53□□□□□ -1.84
PEX3P56589 AC098679.5-201ENST00000624394 571 ntBASIC3.53□□□□□ -1.84
PEX3P56589 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PEX3P56589 AC026634.1-201ENST00000634369 198 ntBASIC3.53□□□□□ -1.84
PEX3P56589 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.53□□□□□ -1.84
PEX3P56589 FAM157B-203ENST00000639350 358 ntBASIC3.53□□□□□ -1.84
PEX3P56589 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
PEX3P56589 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
PEX3P56589 AC099786.3-201ENST00000565735 1410 ntBASIC3.53□□□□□ -1.85
PEX3P56589 AC138915.3-201ENST00000562908 1389 ntBASIC3.52□□□□□ -1.85
PEX3P56589 ZNF542P-204ENST00000482727 1305 ntBASIC3.52□□□□□ -1.85
PEX3P56589 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PEX3P56589 SNORD116.1-201ENST00000365628 92 ntBASIC3.52□□□□□ -1.85
PEX3P56589 RNU6-441P-201ENST00000384545 106 ntBASIC3.52□□□□□ -1.85
PEX3P56589 EI24P2-201ENST00000397776 1076 ntBASIC3.52□□□□□ -1.85
PEX3P56589 AL121978.1-201ENST00000402778 359 ntBASIC3.52□□□□□ -1.85
PEX3P56589 RNU4-47P-201ENST00000410876 114 ntBASIC3.52□□□□□ -1.85
PEX3P56589 RNA5SP31-201ENST00000411144 127 ntBASIC3.52□□□□□ -1.85
PEX3P56589 AL136133.1-201ENST00000413694 376 ntBASIC3.52□□□□□ -1.85
PEX3P56589 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.52□□□□□ -1.85
PEX3P56589 ELOCP9-201ENST00000418624 239 ntBASIC3.52□□□□□ -1.85
PEX3P56589 KRR1P1-201ENST00000419430 803 ntBASIC3.52□□□□□ -1.85
PEX3P56589 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.52□□□□□ -1.85
PEX3P56589 RPL31P12-201ENST00000422587 358 ntBASIC3.52□□□□□ -1.85
PEX3P56589 AL353678.1-201ENST00000422735 741 ntBASIC3.52□□□□□ -1.85
PEX3P56589 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.52□□□□□ -1.85
PEX3P56589 DPRXP1-201ENST00000426312 460 ntBASIC3.52□□□□□ -1.85
PEX3P56589 BX890604.2-201ENST00000427883 474 ntBASIC3.52□□□□□ -1.85
PEX3P56589 AC005345.1-201ENST00000431868 217 ntBASIC3.52□□□□□ -1.85
PEX3P56589 AL353705.1-201ENST00000433468 480 ntBASIC3.52□□□□□ -1.85
PEX3P56589 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.52□□□□□ -1.85
PEX3P56589 AC084290.1-201ENST00000434995 374 ntBASIC3.52□□□□□ -1.85
PEX3P56589 AC093155.1-201ENST00000440164 826 ntBASIC3.52□□□□□ -1.85
PEX3P56589 AC115115.1-201ENST00000449927 248 ntBASIC3.52□□□□□ -1.85
PEX3P56589 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.52□□□□□ -1.85
PEX3P56589 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.52□□□□□ -1.85
PEX3P56589 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.52□□□□□ -1.85
PEX3P56589 RN7SL863P-201ENST00000462370 296 ntBASIC3.52□□□□□ -1.85
PEX3P56589 AC011979.1-201ENST00000472300 483 ntBASIC3.52□□□□□ -1.85
PEX3P56589 AC087879.1-201ENST00000474343 374 ntBASIC3.52□□□□□ -1.85
PEX3P56589 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.52□□□□□ -1.85
PEX3P56589 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.52□□□□□ -1.85
PEX3P56589 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.52□□□□□ -1.85
PEX3P56589 BOLA3P3-201ENST00000505182 232 ntBASIC3.52□□□□□ -1.85
PEX3P56589 RN7SKP31-201ENST00000516354 278 ntBASIC3.52□□□□□ -1.85
PEX3P56589 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.52□□□□□ -1.85
PEX3P56589 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.52□□□□□ -1.85
PEX3P56589 AP001180.3-201ENST00000582221 145 ntBASIC3.52□□□□□ -1.85
PEX3P56589 MIR5195-201ENST00000583555 115 ntBASIC3.52□□□□□ -1.85
PEX3P56589 AC007687.1-201ENST00000602704 304 ntBASIC3.52□□□□□ -1.85
PEX3P56589 AC010680.4-201ENST00000605334 543 ntBASIC3.52□□□□□ -1.85
PEX3P56589 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.52□□□□□ -1.85
PEX3P56589 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.52□□□□□ -1.85
PEX3P56589 AC100793.4-201ENST00000613683 429 ntBASIC3.52□□□□□ -1.85
PEX3P56589 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.52□□□□□ -1.85
PEX3P56589 XIST_intron.1-201ENST00000619444 68 ntBASIC3.52□□□□□ -1.85
PEX3P56589 AC026422.1-201ENST00000623961 452 ntBASIC3.52□□□□□ -1.85
PEX3P56589 ZNF663P-202ENST00000641770 1131 ntBASIC3.52□□□□□ -1.85
PEX3P56589 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.52□□□□□ -1.85
PEX3P56589 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
PEX3P56589 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PEX3P56589 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.51□□□□□ -1.85
PEX3P56589 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PEX3P56589 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PEX3P56589 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
PEX3P56589 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.51□□□□□ -1.85
PEX3P56589 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.51□□□□□ -1.85
PEX3P56589 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
PEX3P56589 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.51□□□□□ -1.85
PEX3P56589 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.51□□□□□ -1.85
PEX3P56589 AC025125.1-201ENST00000624743 1922 ntBASIC3.51□□□□□ -1.85
PEX3P56589 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.51□□□□□ -1.85
PEX3P56589 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.51□□□□□ -1.85
PEX3P56589 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.51□□□□□ -1.85
PEX3P56589 Y_RNA.408-201ENST00000383987 102 ntBASIC3.51□□□□□ -1.85
PEX3P56589 ANAPC10P1-201ENST00000395991 556 ntBASIC3.51□□□□□ -1.85
PEX3P56589 AL133264.1-201ENST00000407157 562 ntBASIC3.51□□□□□ -1.85
PEX3P56589 AC004987.3-201ENST00000413879 771 ntBASIC3.51□□□□□ -1.85
PEX3P56589 RPS15AP6-201ENST00000420703 385 ntBASIC3.51□□□□□ -1.85
PEX3P56589 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.51□□□□□ -1.85
PEX3P56589 HMGN3P1-201ENST00000453847 193 ntBASIC3.51□□□□□ -1.85
PEX3P56589 RFC5P1-201ENST00000454419 874 ntBASIC3.51□□□□□ -1.85
PEX3P56589 AC005410.1-202ENST00000460347 485 ntBASIC3.51□□□□□ -1.85
PEX3P56589 RPS4XP22-201ENST00000480755 780 ntBASIC3.51□□□□□ -1.85
PEX3P56589 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.51□□□□□ -1.85
PEX3P56589 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.51□□□□□ -1.85
PEX3P56589 TMEM248P1-201ENST00000510579 951 ntBASIC3.51□□□□□ -1.85
PEX3P56589 RN7SKP265-201ENST00000516448 223 ntBASIC3.51□□□□□ -1.85
PEX3P56589 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.51□□□□□ -1.85
PEX3P56589 ARL2BPP5-201ENST00000523141 481 ntBASIC3.51□□□□□ -1.85
PEX3P56589 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.51□□□□□ -1.85
PEX3P56589 AADACP1-206ENST00000561502 1193 ntBASIC3.51□□□□□ -1.85
PEX3P56589 AL158211.1-201ENST00000566763 763 ntBASIC3.51□□□□□ -1.85
PEX3P56589 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.51□□□□□ -1.85
PEX3P56589 AC074051.3-201ENST00000570238 358 ntBASIC3.51□□□□□ -1.85
PEX3P56589 AP001269.3-201ENST00000588718 329 ntBASIC3.51□□□□□ -1.85
PEX3P56589 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms