Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 SNORA70F-201ENST00000384142 135 ntBASIC5.12□□□□□ -1.59
MRE11P49959 Y_RNA.453-201ENST00000384223 109 ntBASIC5.12□□□□□ -1.59
MRE11P49959 U8.14-201ENST00000390843 143 ntBASIC5.12□□□□□ -1.59
MRE11P49959 AL590002.1-201ENST00000406554 418 ntBASIC5.12□□□□□ -1.59
MRE11P49959 FCF1P10-201ENST00000407590 479 ntBASIC5.12□□□□□ -1.59
MRE11P49959 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.12□□□□□ -1.59
MRE11P49959 RNU2-41P-201ENST00000410991 178 ntBASIC5.12□□□□□ -1.59
MRE11P49959 SNORA74C-2-201ENST00000411179 201 ntBASIC5.12□□□□□ -1.59
MRE11P49959 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.12□□□□□ -1.59
MRE11P49959 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.12□□□□□ -1.59
MRE11P49959 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.12□□□□□ -1.59
MRE11P49959 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.12□□□□□ -1.59
MRE11P49959 CBX1P4-201ENST00000439415 457 ntBASIC5.12□□□□□ -1.59
MRE11P49959 GDI2P2-201ENST00000445131 608 ntBASIC5.12□□□□□ -1.59
MRE11P49959 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.12□□□□□ -1.59
MRE11P49959 CEACAMP6-201ENST00000452007 574 ntBASIC5.12□□□□□ -1.59
MRE11P49959 IFNWP4-201ENST00000453148 294 ntBASIC5.12□□□□□ -1.59
MRE11P49959 TRGVB-201ENST00000453257 471 ntBASIC5.12□□□□□ -1.59
MRE11P49959 AC079168.2-201ENST00000453977 416 ntBASIC5.12□□□□□ -1.59
MRE11P49959 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.12□□□□□ -1.59
MRE11P49959 RN7SL319P-201ENST00000480656 221 ntBASIC5.12□□□□□ -1.59
MRE11P49959 AC005912.1-201ENST00000495392 255 ntBASIC5.12□□□□□ -1.59
MRE11P49959 AC108078.1-201ENST00000508073 725 ntBASIC5.12□□□□□ -1.59
MRE11P49959 PTGES3P3-201ENST00000511479 482 ntBASIC5.12□□□□□ -1.59
MRE11P49959 RNU1-6P-201ENST00000516290 144 ntBASIC5.12□□□□□ -1.59
MRE11P49959 RNU1-45P-201ENST00000517191 141 ntBASIC5.12□□□□□ -1.59
MRE11P49959 MTCO2P4-201ENST00000517968 247 ntBASIC5.12□□□□□ -1.59
MRE11P49959 AF279873.1-201ENST00000523393 313 ntBASIC5.12□□□□□ -1.59
MRE11P49959 AP004247.1-201ENST00000531556 1289 ntBASIC5.12□□□□□ -1.59
MRE11P49959 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.12□□□□□ -1.59
MRE11P49959 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.12□□□□□ -1.59
MRE11P49959 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.12□□□□□ -1.59
MRE11P49959 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.12□□□□□ -1.59
MRE11P49959 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.12□□□□□ -1.59
MRE11P49959 AC137800.2-201ENST00000574375 120 ntBASIC5.12□□□□□ -1.59
MRE11P49959 MIR4716-201ENST00000579628 84 ntBASIC5.12□□□□□ -1.59
MRE11P49959 AC112187.2-201ENST00000604345 283 ntBASIC5.12□□□□□ -1.59
MRE11P49959 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.12□□□□□ -1.59
MRE11P49959 AL592295.2-201ENST00000612578 206 ntBASIC5.12□□□□□ -1.59
MRE11P49959 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.12□□□□□ -1.59
MRE11P49959 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
MRE11P49959 AC099654.5-201ENST00000636479 350 ntBASIC5.12□□□□□ -1.59
MRE11P49959 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.12□□□□□ -1.59
MRE11P49959 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
MRE11P49959 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.12□□□□□ -1.59
MRE11P49959 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MRE11P49959 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MRE11P49959 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
MRE11P49959 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
MRE11P49959 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
MRE11P49959 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.11□□□□□ -1.59
MRE11P49959 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.11□□□□□ -1.59
MRE11P49959 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.11□□□□□ -1.59
MRE11P49959 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
MRE11P49959 AL049555.1-201ENST00000562834 1933 ntBASIC5.11□□□□□ -1.59
MRE11P49959 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
MRE11P49959 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
MRE11P49959 SNRPEP3-201ENST00000338402 276 ntBASIC5.11□□□□□ -1.59
MRE11P49959 Y_RNA.11-201ENST00000362375 109 ntBASIC5.11□□□□□ -1.59
MRE11P49959 RNA5SP322-201ENST00000363617 119 ntBASIC5.11□□□□□ -1.59
MRE11P49959 RNA5SP509-201ENST00000364577 119 ntBASIC5.11□□□□□ -1.59
MRE11P49959 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
MRE11P49959 RNU1-82P-201ENST00000390851 165 ntBASIC5.11□□□□□ -1.59
MRE11P49959 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.11□□□□□ -1.59
MRE11P49959 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.11□□□□□ -1.59
MRE11P49959 RAD23BP1-201ENST00000421404 1227 ntBASIC5.11□□□□□ -1.59
MRE11P49959 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.11□□□□□ -1.59
MRE11P49959 BTF3P10-201ENST00000433415 495 ntBASIC5.11□□□□□ -1.59
MRE11P49959 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.11□□□□□ -1.59
MRE11P49959 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.11□□□□□ -1.59
MRE11P49959 PHBP16-201ENST00000446318 950 ntBASIC5.11□□□□□ -1.59
MRE11P49959 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.11□□□□□ -1.59
MRE11P49959 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.11□□□□□ -1.59
MRE11P49959 RPL21P71-201ENST00000465598 459 ntBASIC5.11□□□□□ -1.59
MRE11P49959 AC069439.1-201ENST00000494739 167 ntBASIC5.11□□□□□ -1.59
MRE11P49959 AC114981.1-201ENST00000503897 678 ntBASIC5.11□□□□□ -1.59
MRE11P49959 AL592156.1-201ENST00000508758 304 ntBASIC5.11□□□□□ -1.59
MRE11P49959 MTND5P4-201ENST00000514978 288 ntBASIC5.11□□□□□ -1.59
MRE11P49959 MIR2114-201ENST00000516645 80 ntBASIC5.11□□□□□ -1.59
MRE11P49959 SNORA18.6-201ENST00000516792 115 ntBASIC5.11□□□□□ -1.59
MRE11P49959 AP001880.2-201ENST00000538233 448 ntBASIC5.11□□□□□ -1.59
MRE11P49959 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.11□□□□□ -1.59
MRE11P49959 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.11□□□□□ -1.59
MRE11P49959 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.11□□□□□ -1.59
MRE11P49959 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.11□□□□□ -1.59
MRE11P49959 AC022726.1-201ENST00000587475 207 ntBASIC5.11□□□□□ -1.59
MRE11P49959 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.11□□□□□ -1.59
MRE11P49959 AC008739.3-201ENST00000603262 127 ntBASIC5.11□□□□□ -1.59
MRE11P49959 AC112191.3-201ENST00000604371 277 ntBASIC5.11□□□□□ -1.59
MRE11P49959 AC002553.4-201ENST00000616896 331 ntBASIC5.11□□□□□ -1.59
MRE11P49959 AC136475.10-201ENST00000620253 385 ntBASIC5.11□□□□□ -1.59
MRE11P49959 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.11□□□□□ -1.59
MRE11P49959 CDRT1-208ENST00000630868 794 ntBASIC5.11□□□□□ -1.59
MRE11P49959 MIR6863-201ENST00000636112 90 ntBASIC5.11□□□□□ -1.59
MRE11P49959 AC010928.1-201ENST00000592477 1447 ntBASIC5.11□□□□□ -1.59
MRE11P49959 OR4G11P-202ENST00000642116 1414 ntBASIC5.11□□□□□ -1.59
MRE11P49959 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.11□□□□□ -1.59
MRE11P49959 AC007390.2-201ENST00000606229 3803 ntBASIC5.11□□□□□ -1.59
MRE11P49959 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
MRE11P49959 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms