Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.11□□□□□ -1.91
RORAP35398 BX649567.1-201ENST00000642071 1134 ntBASIC3.11□□□□□ -1.91
RORAP35398 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.11□□□□□ -1.91
RORAP35398 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
RORAP35398 AL136520.1-201ENST00000600311 1322 ntBASIC3.11□□□□□ -1.91
RORAP35398 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RORAP35398 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.11□□□□□ -1.91
RORAP35398 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RORAP35398 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RORAP35398 SGO1P1-201ENST00000603525 1447 ntBASIC3.1□□□□□ -1.91
RORAP35398 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
RORAP35398 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
RORAP35398 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
RORAP35398 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
RORAP35398 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RORAP35398 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RORAP35398 OR1L1-202ENST00000373686 1083 ntBASIC3.1□□□□□ -1.91
RORAP35398 RNU6-468P-201ENST00000384003 109 ntBASIC3.1□□□□□ -1.91
RORAP35398 RNU6-921P-201ENST00000384361 107 ntBASIC3.1□□□□□ -1.91
RORAP35398 GSTA8P-201ENST00000404253 637 ntBASIC3.1□□□□□ -1.91
RORAP35398 RNU6-1077P-201ENST00000410506 102 ntBASIC3.1□□□□□ -1.91
RORAP35398 RNA5SP31-201ENST00000411144 127 ntBASIC3.1□□□□□ -1.91
RORAP35398 AC096664.2-201ENST00000411843 406 ntBASIC3.1□□□□□ -1.91
RORAP35398 TAF13P2-201ENST00000416876 286 ntBASIC3.1□□□□□ -1.91
RORAP35398 SDCBPP3-201ENST00000419629 891 ntBASIC3.1□□□□□ -1.91
RORAP35398 YPEL5P1-201ENST00000419731 367 ntBASIC3.1□□□□□ -1.91
RORAP35398 GTF2IP23-201ENST00000423746 351 ntBASIC3.1□□□□□ -1.91
RORAP35398 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.1□□□□□ -1.91
RORAP35398 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.1□□□□□ -1.91
RORAP35398 AL445669.2-201ENST00000454425 421 ntBASIC3.1□□□□□ -1.91
RORAP35398 RN7SL283P-201ENST00000489055 303 ntBASIC3.1□□□□□ -1.91
RORAP35398 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RORAP35398 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RORAP35398 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.1□□□□□ -1.91
RORAP35398 AC011352.3-201ENST00000505162 593 ntBASIC3.1□□□□□ -1.91
RORAP35398 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RORAP35398 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.1□□□□□ -1.91
RORAP35398 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RORAP35398 AP000790.1-201ENST00000528891 737 ntBASIC3.1□□□□□ -1.91
RORAP35398 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RORAP35398 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.1□□□□□ -1.91
RORAP35398 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.1□□□□□ -1.91
RORAP35398 AC074051.3-201ENST00000570238 358 ntBASIC3.1□□□□□ -1.91
RORAP35398 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.1□□□□□ -1.91
RORAP35398 BDH2P1-201ENST00000602288 736 ntBASIC3.1□□□□□ -1.91
RORAP35398 AL355812.1-201ENST00000603215 216 ntBASIC3.1□□□□□ -1.91
RORAP35398 AL110115.1-201ENST00000614396 364 ntBASIC3.1□□□□□ -1.91
RORAP35398 AC026422.1-201ENST00000623961 452 ntBASIC3.1□□□□□ -1.91
RORAP35398 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.1□□□□□ -1.91
RORAP35398 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.1□□□□□ -1.91
RORAP35398 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RORAP35398 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RORAP35398 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RORAP35398 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
RORAP35398 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.09□□□□□ -1.91
RORAP35398 AC117529.2-201ENST00000512159 2068 ntBASIC3.09□□□□□ -1.91
RORAP35398 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
RORAP35398 MIR30E-201ENST00000362104 92 ntBASIC3.09□□□□□ -1.91
RORAP35398 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RORAP35398 U6.112-201ENST00000384129 70 ntBASIC3.09□□□□□ -1.91
RORAP35398 SNORA48.5-201ENST00000391143 135 ntBASIC3.09□□□□□ -1.91
RORAP35398 RNA5SP56-201ENST00000410277 118 ntBASIC3.09□□□□□ -1.91
RORAP35398 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.09□□□□□ -1.91
RORAP35398 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RORAP35398 AL353678.1-201ENST00000422735 741 ntBASIC3.09□□□□□ -1.91
RORAP35398 UBE2V1P6-201ENST00000430840 422 ntBASIC3.09□□□□□ -1.91
RORAP35398 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.09□□□□□ -1.91
RORAP35398 RPL23AP69-201ENST00000431134 458 ntBASIC3.09□□□□□ -1.91
RORAP35398 OR2B8P-201ENST00000432841 938 ntBASIC3.09□□□□□ -1.91
RORAP35398 AL353705.1-201ENST00000433468 480 ntBASIC3.09□□□□□ -1.91
RORAP35398 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.09□□□□□ -1.91
RORAP35398 AC127537.2-201ENST00000439258 465 ntBASIC3.09□□□□□ -1.91
RORAP35398 TRIM60P18-201ENST00000441518 828 ntBASIC3.09□□□□□ -1.91
RORAP35398 AL034418.1-201ENST00000448675 860 ntBASIC3.09□□□□□ -1.91
RORAP35398 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RORAP35398 AL136126.1-201ENST00000473603 402 ntBASIC3.09□□□□□ -1.91
RORAP35398 RPS3AP43-201ENST00000479743 781 ntBASIC3.09□□□□□ -1.91
RORAP35398 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.09□□□□□ -1.91
RORAP35398 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.09□□□□□ -1.91
RORAP35398 AC105914.1-201ENST00000511798 226 ntBASIC3.09□□□□□ -1.91
RORAP35398 FABP5P12-201ENST00000515543 389 ntBASIC3.09□□□□□ -1.91
RORAP35398 RNA5SP385-201ENST00000515947 110 ntBASIC3.09□□□□□ -1.91
RORAP35398 RNU6-467P-201ENST00000517027 110 ntBASIC3.09□□□□□ -1.91
RORAP35398 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.09□□□□□ -1.91
RORAP35398 AC239860.2-201ENST00000525886 270 ntBASIC3.09□□□□□ -1.91
RORAP35398 OR4A45P-201ENST00000529954 901 ntBASIC3.09□□□□□ -1.91
RORAP35398 AL121603.1-201ENST00000553815 142 ntBASIC3.09□□□□□ -1.91
RORAP35398 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.09□□□□□ -1.91
RORAP35398 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.09□□□□□ -1.91
RORAP35398 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.09□□□□□ -1.91
RORAP35398 VN1R92P-201ENST00000598511 928 ntBASIC3.09□□□□□ -1.91
RORAP35398 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.09□□□□□ -1.91
RORAP35398 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.09□□□□□ -1.91
RORAP35398 BNIP3P19-201ENST00000605397 577 ntBASIC3.09□□□□□ -1.91
RORAP35398 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.09□□□□□ -1.91
RORAP35398 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RORAP35398 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.09□□□□□ -1.91
RORAP35398 uc_338.1-201ENST00000612113 180 ntBASIC3.09□□□□□ -1.91
RORAP35398 AL157817.1-201ENST00000614264 790 ntBASIC3.09□□□□□ -1.91
RORAP35398 AC002076.2-201ENST00000617362 122 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms