Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC018755.4-201ENST00000619715 454 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 AC099842.1-201ENST00000619919 596 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 AL139089.1-201ENST00000620372 975 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.05□□□□□ -1.6
CNGA1P29973 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.05□□□□□ -1.6
CNGA1P29973 AC009902.3-201ENST00000606235 2172 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CNGA1P29973 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNGA1P29973 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNGA1P29973 AL158163.1-201ENST00000603915 1649 ntBASIC5.05□□□□□ -1.6
CNGA1P29973 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNGA1P29973 MTND4P5-201ENST00000435821 1374 ntBASIC5.04□□□□□ -1.6
CNGA1P29973 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNGA1P29973 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.04□□□□□ -1.6
CNGA1P29973 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CNGA1P29973 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
CNGA1P29973 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.04□□□□□ -1.6
CNGA1P29973 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNGA1P29973 PPIAP31-201ENST00000405422 495 ntBASIC5.04□□□□□ -1.6
CNGA1P29973 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.04□□□□□ -1.6
CNGA1P29973 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.04□□□□□ -1.6
CNGA1P29973 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CNGA1P29973 AC112653.1-201ENST00000443851 386 ntBASIC5.04□□□□□ -1.6
CNGA1P29973 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.04□□□□□ -1.6
CNGA1P29973 AC098824.1-201ENST00000453565 980 ntBASIC5.04□□□□□ -1.6
CNGA1P29973 DHFRP3-201ENST00000455595 559 ntBASIC5.04□□□□□ -1.6
CNGA1P29973 KLF3P2-201ENST00000465138 268 ntBASIC5.04□□□□□ -1.6
CNGA1P29973 RN7SL542P-201ENST00000467147 294 ntBASIC5.04□□□□□ -1.6
CNGA1P29973 AC096751.1-202ENST00000502691 1067 ntBASIC5.04□□□□□ -1.6
CNGA1P29973 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.04□□□□□ -1.6
CNGA1P29973 SNORA67.7-201ENST00000516664 135 ntBASIC5.04□□□□□ -1.6
CNGA1P29973 TRAV8-5-201ENST00000537369 341 ntBASIC5.04□□□□□ -1.6
CNGA1P29973 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.04□□□□□ -1.6
CNGA1P29973 MIR3158-1-201ENST00000583596 81 ntBASIC5.04□□□□□ -1.6
CNGA1P29973 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CNGA1P29973 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.04□□□□□ -1.6
CNGA1P29973 HMGN2P28-201ENST00000606102 262 ntBASIC5.04□□□□□ -1.6
CNGA1P29973 OR10AB1P-201ENST00000609613 938 ntBASIC5.04□□□□□ -1.6
CNGA1P29973 AL136964.1-201ENST00000622038 2990 ntBASIC5.04□□□□□ -1.6
CNGA1P29973 AC079597.1-201ENST00000624306 508 ntBASIC5.04□□□□□ -1.6
CNGA1P29973 AC244517.1-201ENST00000606030 2086 ntBASIC5.04□□□□□ -1.6
CNGA1P29973 AL356489.2-201ENST00000566968 3528 ntBASIC5.04□□□□□ -1.6
CNGA1P29973 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNGA1P29973 AC011460.1-201ENST00000636268 1834 ntBASIC5.04□□□□□ -1.6
CNGA1P29973 LARP1BP1-201ENST00000506036 1359 ntBASIC5.04□□□□□ -1.6
CNGA1P29973 AC125257.1-201ENST00000560400 2930 ntBASIC5.03□□□□□ -1.6
CNGA1P29973 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.03□□□□□ -1.6
CNGA1P29973 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.03□□□□□ -1.6
CNGA1P29973 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CNGA1P29973 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNGA1P29973 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNGA1P29973 AC095050.2-201ENST00000510748 1458 ntBASIC5.03□□□□□ -1.6
CNGA1P29973 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.03□□□□□ -1.6
CNGA1P29973 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CNGA1P29973 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.03□□□□□ -1.6
CNGA1P29973 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNGA1P29973 AL583834.1-201ENST00000406943 343 ntBASIC5.03□□□□□ -1.6
CNGA1P29973 RNU2-47P-201ENST00000410649 186 ntBASIC5.03□□□□□ -1.6
CNGA1P29973 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.03□□□□□ -1.6
CNGA1P29973 AC010975.2-201ENST00000427781 588 ntBASIC5.03□□□□□ -1.6
CNGA1P29973 AC006946.1-201ENST00000429106 328 ntBASIC5.03□□□□□ -1.6
CNGA1P29973 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.03□□□□□ -1.6
CNGA1P29973 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.03□□□□□ -1.6
CNGA1P29973 ELOCP30-201ENST00000447108 299 ntBASIC5.03□□□□□ -1.6
CNGA1P29973 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.03□□□□□ -1.6
CNGA1P29973 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.03□□□□□ -1.6
CNGA1P29973 AC012671.1-201ENST00000451912 203 ntBASIC5.03□□□□□ -1.6
CNGA1P29973 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.03□□□□□ -1.6
CNGA1P29973 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.03□□□□□ -1.6
CNGA1P29973 AL139099.1-201ENST00000497398 403 ntBASIC5.03□□□□□ -1.6
CNGA1P29973 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.03□□□□□ -1.6
CNGA1P29973 RN7SKP298-201ENST00000515950 94 ntBASIC5.03□□□□□ -1.6
CNGA1P29973 AC022616.6-201ENST00000520479 119 ntBASIC5.03□□□□□ -1.6
CNGA1P29973 DYNLL1P4-201ENST00000549314 266 ntBASIC5.03□□□□□ -1.6
CNGA1P29973 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.03□□□□□ -1.6
CNGA1P29973 AL157394.1-201ENST00000562983 1224 ntBASIC5.03□□□□□ -1.6
CNGA1P29973 EIF1P4-201ENST00000572664 335 ntBASIC5.03□□□□□ -1.6
CNGA1P29973 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.03□□□□□ -1.6
CNGA1P29973 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.03□□□□□ -1.6
CNGA1P29973 AC090578.1-201ENST00000604955 591 ntBASIC5.03□□□□□ -1.6
CNGA1P29973 AC008121.2-201ENST00000614647 523 ntBASIC5.03□□□□□ -1.6
CNGA1P29973 AL158196.1-201ENST00000616786 434 ntBASIC5.03□□□□□ -1.6
CNGA1P29973 AC009159.1-201ENST00000618386 642 ntBASIC5.03□□□□□ -1.6
CNGA1P29973 AC012150.2-201ENST00000621300 544 ntBASIC5.03□□□□□ -1.6
CNGA1P29973 AL356585.4-201ENST00000623078 1229 ntBASIC5.03□□□□□ -1.6
CNGA1P29973 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.03□□□□□ -1.6
CNGA1P29973 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNGA1P29973 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNGA1P29973 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNGA1P29973 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNGA1P29973 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CNGA1P29973 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CNGA1P29973 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.02□□□□□ -1.61
CNGA1P29973 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNGA1P29973 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNGA1P29973 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CNGA1P29973 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNGA1P29973 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CNGA1P29973 RNU6-1249P-201ENST00000363237 111 ntBASIC5.02□□□□□ -1.61
CNGA1P29973 U3.15-201ENST00000365398 212 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms