Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 RNU6-1092P-201ENST00000516955 87 ntBASIC5.27□□□□□ -1.57
COL8A1P27658 SCARNA24.2-201ENST00000516968 130 ntBASIC5.27□□□□□ -1.57
COL8A1P27658 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.27□□□□□ -1.57
COL8A1P27658 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.27□□□□□ -1.57
COL8A1P27658 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.27□□□□□ -1.57
COL8A1P27658 AL049872.1-201ENST00000556323 322 ntBASIC5.27□□□□□ -1.57
COL8A1P27658 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.27□□□□□ -1.57
COL8A1P27658 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.27□□□□□ -1.57
COL8A1P27658 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.27□□□□□ -1.57
COL8A1P27658 AC009643.2-201ENST00000603543 1448 ntBASIC5.27□□□□□ -1.57
COL8A1P27658 AC108706.1-201ENST00000611053 297 ntBASIC5.27□□□□□ -1.57
COL8A1P27658 MIR1244-1-201ENST00000612829 85 ntBASIC5.27□□□□□ -1.57
COL8A1P27658 AP001784.1-201ENST00000624107 428 ntBASIC5.27□□□□□ -1.57
COL8A1P27658 AC091895.1-201ENST00000624494 256 ntBASIC5.27□□□□□ -1.57
COL8A1P27658 MIR1244-3-201ENST00000635744 85 ntBASIC5.27□□□□□ -1.57
COL8A1P27658 MIR1244-2-201ENST00000636449 85 ntBASIC5.27□□□□□ -1.57
COL8A1P27658 MIR1244-4-202ENST00000636813 85 ntBASIC5.27□□□□□ -1.57
COL8A1P27658 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
COL8A1P27658 AC022905.1-201ENST00000503430 3048 ntBASIC5.27□□□□□ -1.57
COL8A1P27658 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL8A1P27658 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL8A1P27658 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.27□□□□□ -1.57
COL8A1P27658 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL8A1P27658 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL8A1P27658 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
COL8A1P27658 AC025809.2-201ENST00000625085 1802 ntBASIC5.27□□□□□ -1.57
COL8A1P27658 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL8A1P27658 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.27□□□□□ -1.57
COL8A1P27658 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.27□□□□□ -1.57
COL8A1P27658 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL8A1P27658 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
COL8A1P27658 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL8A1P27658 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL8A1P27658 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
COL8A1P27658 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL8A1P27658 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL8A1P27658 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL8A1P27658 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.26□□□□□ -1.57
COL8A1P27658 RNU6-1298P-201ENST00000362456 101 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 RNU6-1303P-201ENST00000364841 107 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 RNY4P28-201ENST00000365281 93 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 Y_RNA.343-201ENST00000365354 112 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 MIR141-201ENST00000384975 95 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
COL8A1P27658 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
COL8A1P27658 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.26□□□□□ -1.57
COL8A1P27658 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.26□□□□□ -1.57
COL8A1P27658 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.26□□□□□ -1.57
COL8A1P27658 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.26□□□□□ -1.57
COL8A1P27658 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.26□□□□□ -1.57
COL8A1P27658 AL451136.1-201ENST00000435399 325 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 CBX1P4-201ENST00000439415 457 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.26□□□□□ -1.57
COL8A1P27658 AZGP1P2-201ENST00000454506 345 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 AP000942.1-201ENST00000463969 747 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 RPS23P6-201ENST00000466136 431 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 AL355032.1-201ENST00000472981 438 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 RPL7AP6-201ENST00000477943 801 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.26□□□□□ -1.57
COL8A1P27658 RPSAP50-201ENST00000481955 852 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 RN7SL561P-201ENST00000488553 281 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.26□□□□□ -1.57
COL8A1P27658 OR51K1P-201ENST00000510214 950 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 AC106800.3-201ENST00000511389 308 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 NDUFB4P9-201ENST00000511646 388 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.26□□□□□ -1.57
COL8A1P27658 IGLV3-30-201ENST00000524362 298 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 HMGB1P42-201ENST00000532126 553 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.26□□□□□ -1.57
COL8A1P27658 AC063949.1-201ENST00000552900 865 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.26□□□□□ -1.57
COL8A1P27658 AC018552.1-201ENST00000562099 811 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.26□□□□□ -1.57
COL8A1P27658 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.26□□□□□ -1.57
COL8A1P27658 MIR4300-201ENST00000581016 96 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.26□□□□□ -1.57
COL8A1P27658 AL136131.3-201ENST00000607600 188 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.26□□□□□ -1.57
COL8A1P27658 AL049794.2-201ENST00000616301 365 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 CU639417.4-201ENST00000623928 207 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.26□□□□□ -1.57
COL8A1P27658 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.26□□□□□ -1.57
COL8A1P27658 AC024651.2-201ENST00000562480 2098 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL8A1P27658 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL8A1P27658 AP000560.1-201ENST00000624150 1937 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 AC092724.1-201ENST00000624623 3397 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 AC024587.1-201ENST00000505925 2157 ntBASIC5.26□□□□□ -1.57
COL8A1P27658 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL8A1P27658 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
COL8A1P27658 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL8A1P27658 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL8A1P27658 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.26□□□□□ -1.57
COL8A1P27658 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL8A1P27658 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.26□□□□□ -1.57
COL8A1P27658 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL8A1P27658 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.26□□□□□ -1.57
COL8A1P27658 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 PARP4P2-201ENST00000446672 3326 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms