Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AL136310.1-201ENST00000404926 654 ntBASIC3.55□□□□□ -1.84
VCLP18206 AL590084.1-201ENST00000407885 387 ntBASIC3.55□□□□□ -1.84
VCLP18206 AL450338.1-201ENST00000407987 512 ntBASIC3.55□□□□□ -1.84
VCLP18206 SNORA11-201ENST00000408789 128 ntBASIC3.55□□□□□ -1.84
VCLP18206 RPS29P4-201ENST00000414733 161 ntBASIC3.55□□□□□ -1.84
VCLP18206 BX679664.1-201ENST00000434429 253 ntBASIC3.55□□□□□ -1.84
VCLP18206 EEF1A1P39-201ENST00000440791 250 ntBASIC3.55□□□□□ -1.84
VCLP18206 MTCO2P25-201ENST00000447065 681 ntBASIC3.55□□□□□ -1.84
VCLP18206 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.55□□□□□ -1.84
VCLP18206 AL589880.1-201ENST00000448271 287 ntBASIC3.55□□□□□ -1.84
VCLP18206 RPL7P52-201ENST00000449200 742 ntBASIC3.55□□□□□ -1.84
VCLP18206 PDSS1P2-201ENST00000449397 678 ntBASIC3.55□□□□□ -1.84
VCLP18206 HMGN2P16-201ENST00000456802 261 ntBASIC3.55□□□□□ -1.84
VCLP18206 BTF3P5-201ENST00000457252 467 ntBASIC3.55□□□□□ -1.84
VCLP18206 AC026410.2-201ENST00000460281 156 ntBASIC3.55□□□□□ -1.84
VCLP18206 RPS15AP17-201ENST00000470598 390 ntBASIC3.55□□□□□ -1.84
VCLP18206 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.55□□□□□ -1.84
VCLP18206 AC023598.1-201ENST00000472521 361 ntBASIC3.55□□□□□ -1.84
VCLP18206 ST13P14-201ENST00000474095 734 ntBASIC3.55□□□□□ -1.84
VCLP18206 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VCLP18206 AC106707.2-201ENST00000484182 374 ntBASIC3.55□□□□□ -1.84
VCLP18206 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.55□□□□□ -1.84
VCLP18206 HMGB3P15-201ENST00000507326 574 ntBASIC3.55□□□□□ -1.84
VCLP18206 HMGB1P28-201ENST00000507778 552 ntBASIC3.55□□□□□ -1.84
VCLP18206 RNA5SP468-201ENST00000516782 93 ntBASIC3.55□□□□□ -1.84
VCLP18206 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.55□□□□□ -1.84
VCLP18206 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.55□□□□□ -1.84
VCLP18206 SLC2A13P1-201ENST00000531560 322 ntBASIC3.55□□□□□ -1.84
VCLP18206 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VCLP18206 AC005832.3-201ENST00000537929 631 ntBASIC3.55□□□□□ -1.84
VCLP18206 AC018630.1-201ENST00000541376 925 ntBASIC3.55□□□□□ -1.84
VCLP18206 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.55□□□□□ -1.84
VCLP18206 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.55□□□□□ -1.84
VCLP18206 AL132657.2-201ENST00000564417 358 ntBASIC3.55□□□□□ -1.84
VCLP18206 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VCLP18206 AC245036.5-201ENST00000596330 847 ntBASIC3.55□□□□□ -1.84
VCLP18206 BNIP3P26-201ENST00000600827 554 ntBASIC3.55□□□□□ -1.84
VCLP18206 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.55□□□□□ -1.84
VCLP18206 U3.45-201ENST00000607547 219 ntBASIC3.55□□□□□ -1.84
VCLP18206 AC080013.4-201ENST00000607624 649 ntBASIC3.55□□□□□ -1.84
VCLP18206 AC018816.2-201ENST00000621460 353 ntBASIC3.55□□□□□ -1.84
VCLP18206 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VCLP18206 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.55□□□□□ -1.84
VCLP18206 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
VCLP18206 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.55□□□□□ -1.84
VCLP18206 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.55□□□□□ -1.84
VCLP18206 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VCLP18206 MIR1322-201ENST00000638013 71 ntBASIC3.55□□□□□ -1.84
VCLP18206 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.55□□□□□ -1.84
VCLP18206 MFSD8-236ENST00000641509 4050 ntBASIC3.55□□□□□ -1.84
VCLP18206 AL513302.2-201ENST00000562313 1842 ntBASIC3.54□□□□□ -1.84
VCLP18206 MIR30E-201ENST00000362104 92 ntBASIC3.54□□□□□ -1.84
VCLP18206 RNU6-1074P-201ENST00000383995 104 ntBASIC3.54□□□□□ -1.84
VCLP18206 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.54□□□□□ -1.84
VCLP18206 RPS3AP37-201ENST00000419176 745 ntBASIC3.54□□□□□ -1.84
VCLP18206 AC069157.1-201ENST00000421749 137 ntBASIC3.54□□□□□ -1.84
VCLP18206 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.54□□□□□ -1.84
VCLP18206 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.54□□□□□ -1.84
VCLP18206 NANOGP2-201ENST00000435391 727 ntBASIC3.54□□□□□ -1.84
VCLP18206 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.54□□□□□ -1.84
VCLP18206 MTND2P20-201ENST00000440805 661 ntBASIC3.54□□□□□ -1.84
VCLP18206 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.54□□□□□ -1.84
VCLP18206 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.54□□□□□ -1.84
VCLP18206 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VCLP18206 AC011979.1-201ENST00000472300 483 ntBASIC3.54□□□□□ -1.84
VCLP18206 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.54□□□□□ -1.84
VCLP18206 SETP14-201ENST00000497538 873 ntBASIC3.54□□□□□ -1.84
VCLP18206 AC006499.5-201ENST00000505037 514 ntBASIC3.54□□□□□ -1.84
VCLP18206 MLLT10P2-201ENST00000506434 249 ntBASIC3.54□□□□□ -1.84
VCLP18206 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.54□□□□□ -1.84
VCLP18206 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.54□□□□□ -1.84
VCLP18206 RNU2-27P-201ENST00000516185 142 ntBASIC3.54□□□□□ -1.84
VCLP18206 IGHV3-76-201ENST00000522465 295 ntBASIC3.54□□□□□ -1.84
VCLP18206 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.54□□□□□ -1.84
VCLP18206 SYF2P1-201ENST00000550658 413 ntBASIC3.54□□□□□ -1.84
VCLP18206 GTF2IP22-201ENST00000554443 182 ntBASIC3.54□□□□□ -1.84
VCLP18206 HSPE1P3-201ENST00000559254 309 ntBASIC3.54□□□□□ -1.84
VCLP18206 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VCLP18206 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.54□□□□□ -1.84
VCLP18206 MIR4429-201ENST00000580105 73 ntBASIC3.54□□□□□ -1.84
VCLP18206 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.54□□□□□ -1.84
VCLP18206 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.54□□□□□ -1.84
VCLP18206 AC091057.3-201ENST00000602684 733 ntBASIC3.54□□□□□ -1.84
VCLP18206 AC011468.4-201ENST00000603942 409 ntBASIC3.54□□□□□ -1.84
VCLP18206 AC006077.1-201ENST00000604746 343 ntBASIC3.54□□□□□ -1.84
VCLP18206 AL590240.3-201ENST00000621416 943 ntBASIC3.54□□□□□ -1.84
VCLP18206 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.54□□□□□ -1.84
VCLP18206 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.54□□□□□ -1.84
VCLP18206 AC009093.8-201ENST00000641769 292 ntBASIC3.54□□□□□ -1.84
VCLP18206 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
VCLP18206 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.54□□□□□ -1.84
VCLP18206 AC093010.3-201ENST00000570269 15214 ntBASIC3.54□□□□□ -1.84
VCLP18206 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VCLP18206 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.54□□□□□ -1.84
VCLP18206 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VCLP18206 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VCLP18206 RNU1-75P-201ENST00000347264 129 ntBASIC3.53□□□□□ -1.84
VCLP18206 SNORD9-201ENST00000362566 104 ntBASIC3.53□□□□□ -1.84
VCLP18206 RNU6-560P-201ENST00000364007 108 ntBASIC3.53□□□□□ -1.84
VCLP18206 RNA5SP42-201ENST00000364278 115 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms