Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.45□□□□□ -1.54
PDGFAP04085 BNIP3P16-201ENST00000589779 534 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 AL354984.3-201ENST00000604803 325 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 AC009229.3-201ENST00000608056 282 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.45□□□□□ -1.54
PDGFAP04085 AC118658.2-201ENST00000618697 459 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 AC092608.2-201ENST00000624427 218 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.45□□□□□ -1.54
PDGFAP04085 MIR4275-201ENST00000636486 87 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFAP04085 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PDGFAP04085 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFAP04085 AC066616.2-201ENST00000559334 1481 ntBASIC5.45□□□□□ -1.54
PDGFAP04085 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
PDGFAP04085 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFAP04085 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFAP04085 FAM91A3P-201ENST00000456826 2544 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFAP04085 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFAP04085 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFAP04085 SNORA23-201ENST00000365128 182 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFAP04085 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFAP04085 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.44□□□□□ -1.54
PDGFAP04085 Y_RNA.463-201ENST00000384271 102 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 SNORA75.6-201ENST00000391318 127 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFAP04085 RNU6-1050P-201ENST00000410388 107 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 OR6E1P-201ENST00000414424 923 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 AL445928.1-201ENST00000435545 222 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.44□□□□□ -1.54
PDGFAP04085 GAPDHP58-201ENST00000438477 1006 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.44□□□□□ -1.54
PDGFAP04085 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFAP04085 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.44□□□□□ -1.54
PDGFAP04085 AL121871.1-201ENST00000443413 436 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 RPL21P23-201ENST00000446654 460 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 MTND5P30-201ENST00000452896 1731 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 AL445687.2-201ENST00000458156 728 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
PDGFAP04085 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.44□□□□□ -1.54
PDGFAP04085 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.44□□□□□ -1.54
PDGFAP04085 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.44□□□□□ -1.54
PDGFAP04085 Y_RNA.689-201ENST00000516589 107 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 RNU6-352P-201ENST00000516908 107 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.44□□□□□ -1.54
PDGFAP04085 AP000676.2-201ENST00000529711 301 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 AL049779.3-201ENST00000557141 606 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.44□□□□□ -1.54
PDGFAP04085 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.44□□□□□ -1.54
PDGFAP04085 MIR4700-201ENST00000578311 74 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.44□□□□□ -1.54
PDGFAP04085 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFAP04085 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC5.44□□□□□ -1.54
PDGFAP04085 AC104763.2-201ENST00000604179 382 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 IMMP1LP3-201ENST00000604197 224 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 IGHV3-29-201ENST00000604817 344 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.44□□□□□ -1.54
PDGFAP04085 AL118522.2-201ENST00000616045 615 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 CU639417.4-201ENST00000623928 207 ntBASIC5.44□□□□□ -1.54
PDGFAP04085 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.44□□□□□ -1.54
PDGFAP04085 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.44□□□□□ -1.54
PDGFAP04085 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.44□□□□□ -1.54
PDGFAP04085 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFAP04085 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFAP04085 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.44□□□□□ -1.54
PDGFAP04085 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.44□□□□□ -1.54
PDGFAP04085 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
PDGFAP04085 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
PDGFAP04085 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
PDGFAP04085 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFAP04085 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFAP04085 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.43□□□□□ -1.54
PDGFAP04085 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFAP04085 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.43□□□□□ -1.54
PDGFAP04085 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFAP04085 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.43□□□□□ -1.54
PDGFAP04085 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFAP04085 AC093849.1-201ENST00000563631 2209 ntBASIC5.43□□□□□ -1.54
PDGFAP04085 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFAP04085 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFAP04085 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
PDGFAP04085 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.43□□□□□ -1.54
PDGFAP04085 SMG1P6-201ENST00000532337 2930 ntBASIC5.43□□□□□ -1.54
PDGFAP04085 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFAP04085 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFAP04085 RNU6-263P-201ENST00000363811 107 ntBASIC5.43□□□□□ -1.54
PDGFAP04085 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.43□□□□□ -1.54
PDGFAP04085 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFAP04085 RNA5SP187-201ENST00000384400 119 ntBASIC5.43□□□□□ -1.54
PDGFAP04085 AL445189.1-201ENST00000405722 338 ntBASIC5.43□□□□□ -1.54
PDGFAP04085 RPS20P1-201ENST00000434853 354 ntBASIC5.43□□□□□ -1.54
PDGFAP04085 RPS27AP3-201ENST00000453803 454 ntBASIC5.43□□□□□ -1.54
PDGFAP04085 RN7SL727P-201ENST00000482164 296 ntBASIC5.43□□□□□ -1.54
PDGFAP04085 AC008953.1-201ENST00000497334 318 ntBASIC5.43□□□□□ -1.54
PDGFAP04085 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.43□□□□□ -1.54
PDGFAP04085 RNU6-1095P-201ENST00000516148 108 ntBASIC5.43□□□□□ -1.54
PDGFAP04085 FTH1P11-201ENST00000517577 551 ntBASIC5.43□□□□□ -1.54
PDGFAP04085 AP006587.4-201ENST00000526053 529 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms