Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AF274854.1-201ENST00000413236 615 ntBASIC3.83□□□□□ -1.8
LDLRP01130 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.83□□□□□ -1.8
LDLRP01130 MTND4P20-201ENST00000424125 869 ntBASIC3.83□□□□□ -1.8
LDLRP01130 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.83□□□□□ -1.8
LDLRP01130 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.83□□□□□ -1.8
LDLRP01130 AL356276.2-201ENST00000435919 558 ntBASIC3.83□□□□□ -1.8
LDLRP01130 YWHAZP7-201ENST00000436906 631 ntBASIC3.83□□□□□ -1.8
LDLRP01130 RPS3AP12-201ENST00000443616 753 ntBASIC3.83□□□□□ -1.8
LDLRP01130 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.83□□□□□ -1.8
LDLRP01130 FABP3P2-201ENST00000453169 399 ntBASIC3.83□□□□□ -1.8
LDLRP01130 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.83□□□□□ -1.8
LDLRP01130 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.83□□□□□ -1.8
LDLRP01130 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.83□□□□□ -1.8
LDLRP01130 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.83□□□□□ -1.8
LDLRP01130 HMGB3P30-201ENST00000457863 606 ntBASIC3.83□□□□□ -1.8
LDLRP01130 RPL7P15-201ENST00000461190 712 ntBASIC3.83□□□□□ -1.8
LDLRP01130 RN7SL271P-201ENST00000487601 295 ntBASIC3.83□□□□□ -1.8
LDLRP01130 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.83□□□□□ -1.8
LDLRP01130 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.83□□□□□ -1.8
LDLRP01130 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.83□□□□□ -1.8
LDLRP01130 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.83□□□□□ -1.8
LDLRP01130 HSPE1P23-201ENST00000509838 286 ntBASIC3.83□□□□□ -1.8
LDLRP01130 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.83□□□□□ -1.8
LDLRP01130 MTND3P5-201ENST00000512798 333 ntBASIC3.83□□□□□ -1.8
LDLRP01130 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.83□□□□□ -1.8
LDLRP01130 RNU6-583P-201ENST00000516012 92 ntBASIC3.83□□□□□ -1.8
LDLRP01130 RNA5SP519-201ENST00000516480 119 ntBASIC3.83□□□□□ -1.8
LDLRP01130 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.83□□□□□ -1.8
LDLRP01130 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.83□□□□□ -1.8
LDLRP01130 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.83□□□□□ -1.8
LDLRP01130 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.83□□□□□ -1.8
LDLRP01130 UBE2NP1-201ENST00000545592 458 ntBASIC3.83□□□□□ -1.8
LDLRP01130 AC092470.1-201ENST00000546187 132 ntBASIC3.83□□□□□ -1.8
LDLRP01130 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.83□□□□□ -1.8
LDLRP01130 LARP7P2-201ENST00000575306 125 ntBASIC3.83□□□□□ -1.8
LDLRP01130 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.83□□□□□ -1.8
LDLRP01130 AC012417.1-201ENST00000582307 1039 ntBASIC3.83□□□□□ -1.8
LDLRP01130 MIR4999-201ENST00000585029 91 ntBASIC3.83□□□□□ -1.8
LDLRP01130 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.83□□□□□ -1.8
LDLRP01130 AC007179.3-201ENST00000604976 235 ntBASIC3.83□□□□□ -1.8
LDLRP01130 AC092354.2-201ENST00000607786 514 ntBASIC3.83□□□□□ -1.8
LDLRP01130 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.83□□□□□ -1.8
LDLRP01130 AL355073.2-201ENST00000612106 557 ntBASIC3.83□□□□□ -1.8
LDLRP01130 AC008083.4-201ENST00000615076 444 ntBASIC3.83□□□□□ -1.8
LDLRP01130 AC084757.4-201ENST00000616350 526 ntBASIC3.83□□□□□ -1.8
LDLRP01130 AC079248.2-201ENST00000623779 326 ntBASIC3.83□□□□□ -1.8
LDLRP01130 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.83□□□□□ -1.8
LDLRP01130 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.83□□□□□ -1.8
LDLRP01130 ZNF37BP-203ENST00000452306 1352 ntBASIC3.83□□□□□ -1.8
LDLRP01130 AC032011.1-201ENST00000611703 1549 ntBASIC3.83□□□□□ -1.8
LDLRP01130 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LDLRP01130 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LDLRP01130 ZNF33CP-201ENST00000432492 2030 ntBASIC3.83□□□□□ -1.8
LDLRP01130 UBE3AP2-201ENST00000429033 2259 ntBASIC3.83□□□□□ -1.8
LDLRP01130 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
LDLRP01130 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LDLRP01130 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.82□□□□□ -1.8
LDLRP01130 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.82□□□□□ -1.8
LDLRP01130 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.82□□□□□ -1.8
LDLRP01130 AC005832.2-201ENST00000538921 1430 ntBASIC3.82□□□□□ -1.8
LDLRP01130 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
LDLRP01130 RNU1-14P-201ENST00000362759 152 ntBASIC3.82□□□□□ -1.8
LDLRP01130 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.82□□□□□ -1.8
LDLRP01130 AC016769.3-201ENST00000396562 315 ntBASIC3.82□□□□□ -1.8
LDLRP01130 RPL23AP29-201ENST00000397284 453 ntBASIC3.82□□□□□ -1.8
LDLRP01130 EIF5P1-201ENST00000400019 1231 ntBASIC3.82□□□□□ -1.8
LDLRP01130 AL138878.1-201ENST00000405131 347 ntBASIC3.82□□□□□ -1.8
LDLRP01130 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.82□□□□□ -1.8
LDLRP01130 USP9YP33-201ENST00000412220 421 ntBASIC3.82□□□□□ -1.8
LDLRP01130 TPT1P2-201ENST00000413105 503 ntBASIC3.82□□□□□ -1.8
LDLRP01130 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.82□□□□□ -1.8
LDLRP01130 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.82□□□□□ -1.8
LDLRP01130 PSMA2P3-201ENST00000429685 675 ntBASIC3.82□□□□□ -1.8
LDLRP01130 KCTD9P3-201ENST00000434597 1169 ntBASIC3.82□□□□□ -1.8
LDLRP01130 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.82□□□□□ -1.8
LDLRP01130 USP9YP35-201ENST00000435696 412 ntBASIC3.82□□□□□ -1.8
LDLRP01130 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.82□□□□□ -1.8
LDLRP01130 RPL23AP46-201ENST00000438548 490 ntBASIC3.82□□□□□ -1.8
LDLRP01130 MTND2P20-201ENST00000440805 661 ntBASIC3.82□□□□□ -1.8
LDLRP01130 AL591503.2-201ENST00000442314 1005 ntBASIC3.82□□□□□ -1.8
LDLRP01130 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.82□□□□□ -1.8
LDLRP01130 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.82□□□□□ -1.8
LDLRP01130 RPL39P6-201ENST00000448289 150 ntBASIC3.82□□□□□ -1.8
LDLRP01130 PPIAP3-201ENST00000450588 505 ntBASIC3.82□□□□□ -1.8
LDLRP01130 AC104073.1-201ENST00000451988 151 ntBASIC3.82□□□□□ -1.8
LDLRP01130 AC097262.1-201ENST00000452559 548 ntBASIC3.82□□□□□ -1.8
LDLRP01130 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.82□□□□□ -1.8
LDLRP01130 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.82□□□□□ -1.8
LDLRP01130 TRBV26-201ENST00000456572 344 ntBASIC3.82□□□□□ -1.8
LDLRP01130 RPL9P32-201ENST00000464118 620 ntBASIC3.82□□□□□ -1.8
LDLRP01130 NCOR1P1-202ENST00000486162 291 ntBASIC3.82□□□□□ -1.8
LDLRP01130 LINC00888-204ENST00000487386 421 ntBASIC3.82□□□□□ -1.8
LDLRP01130 RNF138P1-201ENST00000502765 546 ntBASIC3.82□□□□□ -1.8
LDLRP01130 AC147055.4-201ENST00000504399 745 ntBASIC3.82□□□□□ -1.8
LDLRP01130 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.82□□□□□ -1.8
LDLRP01130 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.82□□□□□ -1.8
LDLRP01130 AC109927.2-201ENST00000506416 303 ntBASIC3.82□□□□□ -1.8
LDLRP01130 AC026412.2-201ENST00000512270 1075 ntBASIC3.82□□□□□ -1.8
LDLRP01130 RNU7-143P-201ENST00000516781 65 ntBASIC3.82□□□□□ -1.8
LDLRP01130 PAICSP4-201ENST00000517543 1253 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms