Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC026523.2-201ENST00000625039 7739 ntBASIC6.57□□□□□ -1.36
RNF40O75150 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF40O75150 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF40O75150 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RNF40O75150 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF40O75150 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF40O75150 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF40O75150 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF40O75150 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF40O75150 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF40O75150 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF40O75150 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF40O75150 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF40O75150 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF40O75150 RNU6-708P-201ENST00000384217 107 ntBASIC6.57□□□□□ -1.36
RNF40O75150 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RNF40O75150 RN7SKP281-201ENST00000410472 352 ntBASIC6.57□□□□□ -1.36
RNF40O75150 AL358176.3-201ENST00000420757 454 ntBASIC6.57□□□□□ -1.36
RNF40O75150 AL591704.1-201ENST00000432574 275 ntBASIC6.57□□□□□ -1.36
RNF40O75150 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF40O75150 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF40O75150 RPL21P104-201ENST00000464143 478 ntBASIC6.57□□□□□ -1.36
RNF40O75150 AC008945.1-201ENST00000505144 499 ntBASIC6.57□□□□□ -1.36
RNF40O75150 AC104057.1-201ENST00000515547 497 ntBASIC6.57□□□□□ -1.36
RNF40O75150 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.57□□□□□ -1.36
RNF40O75150 AC136777.2-201ENST00000522979 358 ntBASIC6.57□□□□□ -1.36
RNF40O75150 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
RNF40O75150 AC126177.3-201ENST00000551839 688 ntBASIC6.57□□□□□ -1.36
RNF40O75150 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF40O75150 MRPS21P8-201ENST00000569196 235 ntBASIC6.57□□□□□ -1.36
RNF40O75150 Z83818.1-201ENST00000603584 150 ntBASIC6.57□□□□□ -1.36
RNF40O75150 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.57□□□□□ -1.36
RNF40O75150 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF40O75150 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.57□□□□□ -1.36
RNF40O75150 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RNF40O75150 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
RNF40O75150 AC138907.8-201ENST00000623981 2256 ntBASIC6.57□□□□□ -1.36
RNF40O75150 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF40O75150 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF40O75150 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF40O75150 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
RNF40O75150 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF40O75150 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.57□□□□□ -1.36
RNF40O75150 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RNF40O75150 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RNF40O75150 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
RNF40O75150 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
RNF40O75150 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
RNF40O75150 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RNF40O75150 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.56□□□□□ -1.36
RNF40O75150 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.56□□□□□ -1.36
RNF40O75150 AC109446.4-201ENST00000623235 2755 ntBASIC6.56□□□□□ -1.36
RNF40O75150 SNORD50.1-201ENST00000362987 71 ntBASIC6.56□□□□□ -1.36
RNF40O75150 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
RNF40O75150 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
RNF40O75150 RN7SKP151-201ENST00000410230 316 ntBASIC6.56□□□□□ -1.36
RNF40O75150 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.56□□□□□ -1.36
RNF40O75150 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.56□□□□□ -1.36
RNF40O75150 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.56□□□□□ -1.36
RNF40O75150 PPIAP3-201ENST00000450588 505 ntBASIC6.56□□□□□ -1.36
RNF40O75150 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
RNF40O75150 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.56□□□□□ -1.36
RNF40O75150 RPL21P103-201ENST00000479921 488 ntBASIC6.56□□□□□ -1.36
RNF40O75150 AC018437.1-201ENST00000492214 406 ntBASIC6.56□□□□□ -1.36
RNF40O75150 AC135721.1-201ENST00000497954 479 ntBASIC6.56□□□□□ -1.36
RNF40O75150 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.56□□□□□ -1.36
RNF40O75150 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RNF40O75150 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.56□□□□□ -1.36
RNF40O75150 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RNF40O75150 SULT1C2P2-201ENST00000562517 294 ntBASIC6.56□□□□□ -1.36
RNF40O75150 AC136932.1-201ENST00000574771 208 ntBASIC6.56□□□□□ -1.36
RNF40O75150 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.56□□□□□ -1.36
RNF40O75150 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.56□□□□□ -1.36
RNF40O75150 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.56□□□□□ -1.36
RNF40O75150 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.56□□□□□ -1.36
RNF40O75150 AL670379.6-201ENST00000603753 252 ntBASIC6.56□□□□□ -1.36
RNF40O75150 AL670379.1-201ENST00000604752 252 ntBASIC6.56□□□□□ -1.36
RNF40O75150 AL670379.5-201ENST00000605253 252 ntBASIC6.56□□□□□ -1.36
RNF40O75150 AL670379.8-201ENST00000605353 252 ntBASIC6.56□□□□□ -1.36
RNF40O75150 AL670379.7-201ENST00000605823 252 ntBASIC6.56□□□□□ -1.36
RNF40O75150 AL512652.1-201ENST00000619006 500 ntBASIC6.56□□□□□ -1.36
RNF40O75150 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.56□□□□□ -1.36
RNF40O75150 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RNF40O75150 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.56□□□□□ -1.36
RNF40O75150 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.56□□□□□ -1.36
RNF40O75150 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RNF40O75150 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.56□□□□□ -1.36
RNF40O75150 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.55□□□□□ -1.36
RNF40O75150 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
RNF40O75150 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RNF40O75150 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RNF40O75150 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.55□□□□□ -1.36
RNF40O75150 AC004656.1-201ENST00000568479 4951 ntBASIC6.55□□□□□ -1.36
RNF40O75150 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RNF40O75150 RNU4-44P-201ENST00000363050 141 ntBASIC6.55□□□□□ -1.36
RNF40O75150 RNA5SP478-201ENST00000364657 115 ntBASIC6.55□□□□□ -1.36
RNF40O75150 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.55□□□□□ -1.36
RNF40O75150 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RNF40O75150 U3.42-201ENST00000408746 214 ntBASIC6.55□□□□□ -1.36
RNF40O75150 HMGN1P20-201ENST00000411849 300 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms