Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MIR514A3-201ENST00000385132 88 ntBASIC4.87□□□□□ -1.63
TRIM13O60858 AC099535.1-201ENST00000408928 371 ntBASIC4.87□□□□□ -1.63
TRIM13O60858 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
TRIM13O60858 RNU6-1304P-201ENST00000411374 106 ntBASIC4.87□□□□□ -1.63
TRIM13O60858 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.87□□□□□ -1.63
TRIM13O60858 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM13O60858 RBMY2KP-201ENST00000418221 992 ntBASIC4.87□□□□□ -1.63
TRIM13O60858 UQCRBP1-201ENST00000421129 336 ntBASIC4.87□□□□□ -1.63
TRIM13O60858 RGS17P1-201ENST00000423358 553 ntBASIC4.87□□□□□ -1.63
TRIM13O60858 AC108075.1-201ENST00000424692 529 ntBASIC4.87□□□□□ -1.63
TRIM13O60858 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM13O60858 HIGD1AP8-201ENST00000453927 274 ntBASIC4.87□□□□□ -1.63
TRIM13O60858 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM13O60858 RNU6-1218P-201ENST00000458990 108 ntBASIC4.87□□□□□ -1.63
TRIM13O60858 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM13O60858 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM13O60858 AC010350.1-201ENST00000504908 231 ntBASIC4.87□□□□□ -1.63
TRIM13O60858 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.87□□□□□ -1.63
TRIM13O60858 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM13O60858 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM13O60858 RNU6-488P-201ENST00000515918 99 ntBASIC4.87□□□□□ -1.63
TRIM13O60858 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.87□□□□□ -1.63
TRIM13O60858 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM13O60858 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM13O60858 OR5B10P-201ENST00000532869 642 ntBASIC4.87□□□□□ -1.63
TRIM13O60858 AC068831.4-201ENST00000556118 109 ntBASIC4.87□□□□□ -1.63
TRIM13O60858 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM13O60858 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM13O60858 RNU6-89P-201ENST00000606519 100 ntBASIC4.87□□□□□ -1.63
TRIM13O60858 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM13O60858 AP001521.1-201ENST00000609150 300 ntBASIC4.87□□□□□ -1.63
TRIM13O60858 AC010149.2-201ENST00000637608 315 ntBASIC4.87□□□□□ -1.63
TRIM13O60858 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM13O60858 AC097461.1-201ENST00000568928 2821 ntBASIC4.87□□□□□ -1.63
TRIM13O60858 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
TRIM13O60858 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM13O60858 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM13O60858 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM13O60858 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM13O60858 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM13O60858 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TRIM13O60858 AC090017.1-201ENST00000548612 1779 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM13O60858 AC092079.1-201ENST00000558620 1985 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM13O60858 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM13O60858 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM13O60858 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TRIM13O60858 RNU6-1097P-201ENST00000363586 107 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 RNU6-169P-201ENST00000365336 107 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM13O60858 SET-203ENST00000372688 801 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM13O60858 RNU6-370P-201ENST00000411008 104 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM13O60858 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM13O60858 AC019097.1-201ENST00000424783 735 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 AL353777.1-201ENST00000425552 326 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM13O60858 RPL7L1P9-201ENST00000431298 745 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM13O60858 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM13O60858 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM13O60858 PRPF38AP2-201ENST00000438179 851 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.86□□□□□ -1.63
TRIM13O60858 FAM103A2P-201ENST00000444122 354 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TRIM13O60858 AC104651.2-201ENST00000447549 528 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 MTND3P16-201ENST00000452205 344 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 SBDSP1-204ENST00000453858 737 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 AL356010.1-201ENST00000456364 102 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 RN7SL515P-201ENST00000463999 297 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 AC108751.2-201ENST00000469993 231 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 AL163973.1-201ENST00000484753 577 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 RN7SL184P-201ENST00000488308 297 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM13O60858 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM13O60858 AC098591.2-201ENST00000510152 315 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 FAM206BP-201ENST00000510179 541 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM13O60858 Y_RNA.665-201ENST00000516177 98 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 Y_RNA.719-201ENST00000517156 106 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM13O60858 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM13O60858 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM13O60858 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM13O60858 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM13O60858 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM13O60858 AC073539.2-201ENST00000597113 165 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.86□□□□□ -1.63
TRIM13O60858 AL589674.2-201ENST00000604304 337 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 AC022893.3-201ENST00000607665 437 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 AL355816.1-201ENST00000607951 118 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 AC083806.3-201ENST00000614016 455 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 CR392039.4-201ENST00000624968 501 ntBASIC4.86□□□□□ -1.63
TRIM13O60858 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
TRIM13O60858 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM13O60858 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM13O60858 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM13O60858 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM13O60858 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms