Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA3O60609 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
GFRA3O60609 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA3O60609 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA3O60609 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC5.97□□□□□ -1.45
GFRA3O60609 AC083843.3-201ENST00000623679 2186 ntBASIC5.97□□□□□ -1.45
GFRA3O60609 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
GFRA3O60609 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA3O60609 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA3O60609 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC5.97□□□□□ -1.45
GFRA3O60609 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
GFRA3O60609 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
GFRA3O60609 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
GFRA3O60609 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.96□□□□□ -1.45
GFRA3O60609 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
GFRA3O60609 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.96□□□□□ -1.45
GFRA3O60609 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
GFRA3O60609 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
GFRA3O60609 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
GFRA3O60609 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
GFRA3O60609 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.96□□□□□ -1.45
GFRA3O60609 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.96□□□□□ -1.45
GFRA3O60609 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
GFRA3O60609 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
GFRA3O60609 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
GFRA3O60609 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA3O60609 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
GFRA3O60609 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA3O60609 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA3O60609 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC5.96□□□□□ -1.46
GFRA3O60609 Y_RNA.136-201ENST00000363444 102 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 Y_RNA.358-201ENST00000365491 99 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 SNORD73A-201ENST00000386062 65 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 HMGN1P24-201ENST00000412282 298 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 CYCSP33-201ENST00000414485 327 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 RPL35AP3-201ENST00000414680 288 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC5.96□□□□□ -1.46
GFRA3O60609 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.96□□□□□ -1.46
GFRA3O60609 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.96□□□□□ -1.46
GFRA3O60609 RNU7-59P-201ENST00000459101 61 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 AC091180.1-201ENST00000462104 372 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 RPS23P6-201ENST00000466136 431 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 AC021074.2-201ENST00000468434 172 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 RPL23AP64-201ENST00000469465 435 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 RPL23AP71-201ENST00000470966 469 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 RPL30P11-201ENST00000495304 339 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA3O60609 SNORA31.3-201ENST00000516029 96 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 Y_RNA.712-201ENST00000517011 92 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 IGKV1D-22-201ENST00000518953 324 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 AC087369.1-201ENST00000520775 996 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 AL110118.1-201ENST00000553543 400 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.96□□□□□ -1.46
GFRA3O60609 AC067852.4-201ENST00000590314 478 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.96□□□□□ -1.46
GFRA3O60609 AC006077.1-201ENST00000604746 343 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.96□□□□□ -1.46
GFRA3O60609 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.96□□□□□ -1.46
GFRA3O60609 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC5.96□□□□□ -1.46
GFRA3O60609 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC5.96□□□□□ -1.46
GFRA3O60609 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC5.96□□□□□ -1.46
GFRA3O60609 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.96□□□□□ -1.46
GFRA3O60609 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA3O60609 AL117339.4-201ENST00000608335 7063 ntBASIC5.96□□□□□ -1.46
GFRA3O60609 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.96□□□□□ -1.46
GFRA3O60609 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
GFRA3O60609 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
GFRA3O60609 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.95□□□□□ -1.46
GFRA3O60609 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA3O60609 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA3O60609 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC5.95□□□□□ -1.46
GFRA3O60609 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.95□□□□□ -1.46
GFRA3O60609 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.95□□□□□ -1.46
GFRA3O60609 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC5.95□□□□□ -1.46
GFRA3O60609 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA3O60609 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.95□□□□□ -1.46
GFRA3O60609 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
GFRA3O60609 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA3O60609 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC5.95□□□□□ -1.46
GFRA3O60609 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA3O60609 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
GFRA3O60609 RNA5SP258-201ENST00000362750 119 ntBASIC5.95□□□□□ -1.46
GFRA3O60609 Y_RNA.238-201ENST00000364441 102 ntBASIC5.95□□□□□ -1.46
GFRA3O60609 U8.8-201ENST00000365399 135 ntBASIC5.95□□□□□ -1.46
GFRA3O60609 SNRPEP6-201ENST00000407465 277 ntBASIC5.95□□□□□ -1.46
GFRA3O60609 RNU6-325P-201ENST00000411132 105 ntBASIC5.95□□□□□ -1.46
GFRA3O60609 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.95□□□□□ -1.46
GFRA3O60609 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.95□□□□□ -1.46
GFRA3O60609 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.95□□□□□ -1.46
GFRA3O60609 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.95□□□□□ -1.46
GFRA3O60609 IFNA11P-201ENST00000446352 526 ntBASIC5.95□□□□□ -1.46
GFRA3O60609 DEFA11P-201ENST00000446470 261 ntBASIC5.95□□□□□ -1.46
GFRA3O60609 AC074290.1-201ENST00000448883 135 ntBASIC5.95□□□□□ -1.46
GFRA3O60609 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC5.95□□□□□ -1.46
GFRA3O60609 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
GFRA3O60609 RPS21P4-201ENST00000487122 248 ntBASIC5.95□□□□□ -1.46
GFRA3O60609 NCOA4P3-201ENST00000513203 1877 ntBASIC5.95□□□□□ -1.46
GFRA3O60609 SUMO2P18-201ENST00000518873 252 ntBASIC5.95□□□□□ -1.46
GFRA3O60609 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
GFRA3O60609 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms