Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.4□□□□□ -1.38
HOXA2O43364 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXA2O43364 AP003733.2-201ENST00000529409 171 ntBASIC6.4□□□□□ -1.38
HOXA2O43364 AC009643.1-201ENST00000532030 391 ntBASIC6.4□□□□□ -1.38
HOXA2O43364 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXA2O43364 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXA2O43364 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXA2O43364 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXA2O43364 AC007566.2-201ENST00000603642 413 ntBASIC6.4□□□□□ -1.38
HOXA2O43364 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXA2O43364 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXA2O43364 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
HOXA2O43364 AOX3P-204ENST00000491025 2107 ntBASIC6.4□□□□□ -1.39
HOXA2O43364 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXA2O43364 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.4□□□□□ -1.39
HOXA2O43364 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.39
HOXA2O43364 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HOXA2O43364 AC020656.2-201ENST00000613291 5309 ntBASIC6.4□□□□□ -1.39
HOXA2O43364 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA2O43364 AC022905.1-201ENST00000503430 3048 ntBASIC6.39□□□□□ -1.39
HOXA2O43364 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA2O43364 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
HOXA2O43364 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
HOXA2O43364 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA2O43364 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HOXA2O43364 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA2O43364 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA2O43364 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXA2O43364 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA2O43364 RNU6-212P-201ENST00000362642 104 ntBASIC6.39□□□□□ -1.39
HOXA2O43364 RN7SKP160-201ENST00000363804 340 ntBASIC6.39□□□□□ -1.39
HOXA2O43364 RNA5SP132-201ENST00000364725 118 ntBASIC6.39□□□□□ -1.39
HOXA2O43364 RNU6-596P-201ENST00000365395 98 ntBASIC6.39□□□□□ -1.39
HOXA2O43364 RNA5SP211-201ENST00000365516 117 ntBASIC6.39□□□□□ -1.39
HOXA2O43364 MIR625-201ENST00000385047 85 ntBASIC6.39□□□□□ -1.39
HOXA2O43364 MTCO3P19-201ENST00000415864 321 ntBASIC6.39□□□□□ -1.39
HOXA2O43364 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXA2O43364 GAPDHP27-201ENST00000447427 1020 ntBASIC6.39□□□□□ -1.39
HOXA2O43364 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXA2O43364 AC007967.1-201ENST00000455422 1159 ntBASIC6.39□□□□□ -1.39
HOXA2O43364 AC010631.1-201ENST00000474150 156 ntBASIC6.39□□□□□ -1.39
HOXA2O43364 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXA2O43364 AC006499.3-201ENST00000506077 748 ntBASIC6.39□□□□□ -1.39
HOXA2O43364 AC026784.1-201ENST00000507986 352 ntBASIC6.39□□□□□ -1.39
HOXA2O43364 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXA2O43364 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXA2O43364 AC027308.1-201ENST00000517993 110 ntBASIC6.39□□□□□ -1.39
HOXA2O43364 OR4H6P-201ENST00000563771 921 ntBASIC6.39□□□□□ -1.39
HOXA2O43364 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXA2O43364 AL390123.1-201ENST00000603216 237 ntBASIC6.39□□□□□ -1.39
HOXA2O43364 AC002044.1-201ENST00000606707 158 ntBASIC6.39□□□□□ -1.39
HOXA2O43364 AC022819.1-201ENST00000563495 3910 ntBASIC6.39□□□□□ -1.39
HOXA2O43364 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA2O43364 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA2O43364 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA2O43364 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA2O43364 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
HOXA2O43364 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA2O43364 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA2O43364 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA2O43364 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA2O43364 AC079753.1-201ENST00000623243 3868 ntBASIC6.39□□□□□ -1.39
HOXA2O43364 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA2O43364 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA2O43364 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
HOXA2O43364 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA2O43364 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXA2O43364 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.38□□□□□ -1.39
HOXA2O43364 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA2O43364 AC007529.1-201ENST00000418574 2178 ntBASIC6.38□□□□□ -1.39
HOXA2O43364 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXA2O43364 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA2O43364 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA2O43364 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA2O43364 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA2O43364 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA2O43364 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
HOXA2O43364 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA2O43364 SNORD8-201ENST00000363915 110 ntBASIC6.38□□□□□ -1.39
HOXA2O43364 SNORD27-201ENST00000363981 72 ntBASIC6.38□□□□□ -1.39
HOXA2O43364 RNU6-1329P-201ENST00000365664 107 ntBASIC6.38□□□□□ -1.39
HOXA2O43364 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXA2O43364 Y_RNA.462-201ENST00000384268 102 ntBASIC6.38□□□□□ -1.39
HOXA2O43364 RNU6-45P-201ENST00000384471 107 ntBASIC6.38□□□□□ -1.39
HOXA2O43364 RNU2-50P-201ENST00000410494 143 ntBASIC6.38□□□□□ -1.39
HOXA2O43364 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXA2O43364 RPS3AP46-201ENST00000448352 682 ntBASIC6.38□□□□□ -1.39
HOXA2O43364 OR2AQ1P-201ENST00000451972 200 ntBASIC6.38□□□□□ -1.39
HOXA2O43364 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXA2O43364 AP000942.1-201ENST00000463969 747 ntBASIC6.38□□□□□ -1.39
HOXA2O43364 RNU6-677P-201ENST00000516914 101 ntBASIC6.38□□□□□ -1.39
HOXA2O43364 RNU6-897P-201ENST00000517135 105 ntBASIC6.38□□□□□ -1.39
HOXA2O43364 CDH12P4-201ENST00000517835 295 ntBASIC6.38□□□□□ -1.39
HOXA2O43364 CDH12P3-201ENST00000517935 295 ntBASIC6.38□□□□□ -1.39
HOXA2O43364 CDH12P1-201ENST00000518435 295 ntBASIC6.38□□□□□ -1.39
HOXA2O43364 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXA2O43364 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXA2O43364 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.38□□□□□ -1.39
HOXA2O43364 AC068446.3-201ENST00000555285 382 ntBASIC6.38□□□□□ -1.39
HOXA2O43364 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms