Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RAC1P7-201ENST00000445367 377 ntBASIC5.54□□□□□ -1.52
SOX1O00570 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.54□□□□□ -1.52
SOX1O00570 USP9YP23-201ENST00000455085 407 ntBASIC5.54□□□□□ -1.52
SOX1O00570 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.54□□□□□ -1.52
SOX1O00570 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.54□□□□□ -1.52
SOX1O00570 AC128716.1-201ENST00000475129 166 ntBASIC5.54□□□□□ -1.52
SOX1O00570 AC068305.1-201ENST00000497406 726 ntBASIC5.54□□□□□ -1.52
SOX1O00570 TRBVA-201ENST00000498804 316 ntBASIC5.54□□□□□ -1.52
SOX1O00570 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX1O00570 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.54□□□□□ -1.52
SOX1O00570 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SOX1O00570 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SOX1O00570 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.54□□□□□ -1.52
SOX1O00570 AC069061.3-201ENST00000582254 823 ntBASIC5.54□□□□□ -1.52
SOX1O00570 AF038458.1-201ENST00000588406 262 ntBASIC5.54□□□□□ -1.52
SOX1O00570 AL390240.1-201ENST00000612950 384 ntBASIC5.54□□□□□ -1.52
SOX1O00570 AP001486.3-201ENST00000615334 372 ntBASIC5.54□□□□□ -1.52
SOX1O00570 AP000843.1-201ENST00000624880 701 ntBASIC5.54□□□□□ -1.52
SOX1O00570 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SOX1O00570 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX1O00570 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SOX1O00570 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX1O00570 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX1O00570 MTND5P28-201ENST00000438005 1594 ntBASIC5.54□□□□□ -1.52
SOX1O00570 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX1O00570 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX1O00570 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.54□□□□□ -1.52
SOX1O00570 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SOX1O00570 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SOX1O00570 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SOX1O00570 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SOX1O00570 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SOX1O00570 AC018628.1-201ENST00000624147 3819 ntBASIC5.53□□□□□ -1.52
SOX1O00570 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SOX1O00570 NXPH1-205ENST00000602349 1953 ntBASIC5.53□□□□□ -1.52
SOX1O00570 AC073365.1-203ENST00000641055 1992 ntBASIC5.53□□□□□ -1.52
SOX1O00570 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SOX1O00570 AC005725.1-201ENST00000577346 2607 ntBASIC5.53□□□□□ -1.52
SOX1O00570 AC009951.1-201ENST00000623674 2614 ntBASIC5.53□□□□□ -1.52
SOX1O00570 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.53□□□□□ -1.52
SOX1O00570 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.53□□□□□ -1.52
SOX1O00570 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SOX1O00570 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.53□□□□□ -1.52
SOX1O00570 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SOX1O00570 RN7SKP280-201ENST00000364196 304 ntBASIC5.53□□□□□ -1.52
SOX1O00570 AL451142.1-201ENST00000375867 775 ntBASIC5.53□□□□□ -1.52
SOX1O00570 SNORA66-201ENST00000384792 133 ntBASIC5.53□□□□□ -1.52
SOX1O00570 MRPL42P3-201ENST00000401492 326 ntBASIC5.53□□□□□ -1.52
SOX1O00570 AL049697.2-201ENST00000403708 294 ntBASIC5.53□□□□□ -1.52
SOX1O00570 AL359643.1-201ENST00000404109 423 ntBASIC5.53□□□□□ -1.52
SOX1O00570 RNU6-954P-201ENST00000411355 107 ntBASIC5.53□□□□□ -1.52
SOX1O00570 AC069218.2-201ENST00000411665 344 ntBASIC5.53□□□□□ -1.52
SOX1O00570 AL358176.3-201ENST00000420757 454 ntBASIC5.53□□□□□ -1.52
SOX1O00570 RPEP3-201ENST00000425462 676 ntBASIC5.53□□□□□ -1.52
SOX1O00570 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.53□□□□□ -1.52
SOX1O00570 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.53□□□□□ -1.52
SOX1O00570 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.53□□□□□ -1.52
SOX1O00570 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.53□□□□□ -1.52
SOX1O00570 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.53□□□□□ -1.52
SOX1O00570 AL353748.1-201ENST00000440753 474 ntBASIC5.53□□□□□ -1.52
SOX1O00570 Z98949.2-201ENST00000440996 144 ntBASIC5.53□□□□□ -1.52
SOX1O00570 RPL23AP43-201ENST00000446445 471 ntBASIC5.53□□□□□ -1.52
SOX1O00570 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.53□□□□□ -1.52
SOX1O00570 MTCO3P10-201ENST00000455912 772 ntBASIC5.53□□□□□ -1.52
SOX1O00570 AC006511.1-201ENST00000470614 315 ntBASIC5.53□□□□□ -1.52
SOX1O00570 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.53□□□□□ -1.52
SOX1O00570 HMGN1P9-201ENST00000515212 298 ntBASIC5.53□□□□□ -1.52
SOX1O00570 RANP9-201ENST00000519957 271 ntBASIC5.53□□□□□ -1.52
SOX1O00570 AC090136.1-201ENST00000520009 240 ntBASIC5.53□□□□□ -1.52
SOX1O00570 AC018442.3-201ENST00000523025 183 ntBASIC5.53□□□□□ -1.52
SOX1O00570 AC109635.4-202ENST00000531666 412 ntBASIC5.53□□□□□ -1.52
SOX1O00570 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.53□□□□□ -1.52
SOX1O00570 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.53□□□□□ -1.52
SOX1O00570 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.53□□□□□ -1.52
SOX1O00570 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.53□□□□□ -1.52
SOX1O00570 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.53□□□□□ -1.52
SOX1O00570 AC008782.1-201ENST00000603386 430 ntBASIC5.53□□□□□ -1.52
SOX1O00570 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.53□□□□□ -1.52
SOX1O00570 AC113194.1-201ENST00000606037 500 ntBASIC5.53□□□□□ -1.52
SOX1O00570 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.53□□□□□ -1.52
SOX1O00570 Z69720.2-201ENST00000624755 279 ntBASIC5.53□□□□□ -1.52
SOX1O00570 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SOX1O00570 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SOX1O00570 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SOX1O00570 AL034549.2-201ENST00000618285 3373 ntBASIC5.53□□□□□ -1.52
SOX1O00570 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SOX1O00570 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SOX1O00570 AC140479.2-201ENST00000421567 3130 ntBASIC5.52□□□□□ -1.53
SOX1O00570 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.52□□□□□ -1.53
SOX1O00570 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SOX1O00570 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SOX1O00570 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
SOX1O00570 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SOX1O00570 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SOX1O00570 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SOX1O00570 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.52□□□□□ -1.53
SOX1O00570 RNU6-1252P-201ENST00000363054 104 ntBASIC5.52□□□□□ -1.53
SOX1O00570 RNU6-511P-201ENST00000363496 107 ntBASIC5.52□□□□□ -1.53
SOX1O00570 RNU6-702P-201ENST00000364982 107 ntBASIC5.52□□□□□ -1.53
SOX1O00570 OR1L6-202ENST00000373684 1044 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms