Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGN4O00479 HIGD1AP2-201ENST00000446367 280 ntBASIC2.02□□□□□ -2.09
HMGN4O00479 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.02□□□□□ -2.09
HMGN4O00479 AL118520.1-201ENST00000450770 291 ntBASIC2.02□□□□□ -2.09
HMGN4O00479 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HMGN4O00479 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.02□□□□□ -2.09
HMGN4O00479 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.02□□□□□ -2.09
HMGN4O00479 AC012182.1-201ENST00000570133 895 ntBASIC2.02□□□□□ -2.09
HMGN4O00479 MTCO3P24-201ENST00000572729 782 ntBASIC2.02□□□□□ -2.09
HMGN4O00479 MIR3690-201ENST00000580266 75 ntBASIC2.02□□□□□ -2.09
HMGN4O00479 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.02□□□□□ -2.09
HMGN4O00479 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGN4O00479 RPL23AP78-201ENST00000599928 470 ntBASIC2.02□□□□□ -2.09
HMGN4O00479 AC079089.3-201ENST00000603094 673 ntBASIC2.02□□□□□ -2.09
HMGN4O00479 AC112503.1-201ENST00000608436 391 ntBASIC2.02□□□□□ -2.09
HMGN4O00479 AC002546.1-201ENST00000588041 2504 ntBASIC2.02□□□□□ -2.09
HMGN4O00479 MTND5P6-201ENST00000422338 1798 ntBASIC2.02□□□□□ -2.09
HMGN4O00479 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HMGN4O00479 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
HMGN4O00479 BTF3P7-201ENST00000407097 488 ntBASIC2.01□□□□□ -2.09
HMGN4O00479 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.01□□□□□ -2.09
HMGN4O00479 HMGN2P35-201ENST00000412164 270 ntBASIC2.01□□□□□ -2.09
HMGN4O00479 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.01□□□□□ -2.09
HMGN4O00479 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.01□□□□□ -2.09
HMGN4O00479 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.01□□□□□ -2.09
HMGN4O00479 PTP4A1P7-201ENST00000423476 514 ntBASIC2.01□□□□□ -2.09
HMGN4O00479 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.01□□□□□ -2.09
HMGN4O00479 HMGB1P45-201ENST00000435986 653 ntBASIC2.01□□□□□ -2.09
HMGN4O00479 SDR42E1P3-201ENST00000438345 502 ntBASIC2.01□□□□□ -2.09
HMGN4O00479 AL591719.1-201ENST00000444669 744 ntBASIC2.01□□□□□ -2.09
HMGN4O00479 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.01□□□□□ -2.09
HMGN4O00479 AC009961.3-201ENST00000449832 765 ntBASIC2.01□□□□□ -2.09
HMGN4O00479 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.01□□□□□ -2.09
HMGN4O00479 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.01□□□□□ -2.09
HMGN4O00479 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.01□□□□□ -2.09
HMGN4O00479 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.01□□□□□ -2.09
HMGN4O00479 SEC11B-201ENST00000518383 499 ntBASIC2.01□□□□□ -2.09
HMGN4O00479 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.01□□□□□ -2.09
HMGN4O00479 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.01□□□□□ -2.09
HMGN4O00479 RPL12P50-201ENST00000603116 116 ntBASIC2.01□□□□□ -2.09
HMGN4O00479 YWHAQP7-201ENST00000603536 658 ntBASIC2.01□□□□□ -2.09
HMGN4O00479 MIR6132-201ENST00000622083 109 ntBASIC2.01□□□□□ -2.09
HMGN4O00479 AC145207.9-201ENST00000623802 325 ntBASIC2.01□□□□□ -2.09
HMGN4O00479 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
HMGN4O00479 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
HMGN4O00479 AC103988.1-201ENST00000566382 2177 ntBASIC2□□□□□ -2.09
HMGN4O00479 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2□□□□□ -2.09
HMGN4O00479 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2□□□□□ -2.09
HMGN4O00479 AC004925.1-201ENST00000624256 2706 ntBASIC2□□□□□ -2.09
HMGN4O00479 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2□□□□□ -2.09
HMGN4O00479 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2□□□□□ -2.09
HMGN4O00479 RPS4XP7-201ENST00000406274 780 ntBASIC2□□□□□ -2.09
HMGN4O00479 HSPE1P1-201ENST00000421494 318 ntBASIC2□□□□□ -2.09
HMGN4O00479 SSXP4-201ENST00000451349 245 ntBASIC2□□□□□ -2.09
HMGN4O00479 AC073901.1-201ENST00000462471 408 ntBASIC2□□□□□ -2.09
HMGN4O00479 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2□□□□□ -2.09
HMGN4O00479 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2□□□□□ -2.09
HMGN4O00479 SCARNA16.3-201ENST00000516595 184 ntBASIC2□□□□□ -2.09
HMGN4O00479 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2□□□□□ -2.09
HMGN4O00479 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2□□□□□ -2.09
HMGN4O00479 AC239860.2-201ENST00000525886 270 ntBASIC2□□□□□ -2.09
HMGN4O00479 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2□□□□□ -2.09
HMGN4O00479 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2□□□□□ -2.09
HMGN4O00479 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2□□□□□ -2.09
HMGN4O00479 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HMGN4O00479 MTCO1P6-201ENST00000481192 1384 ntBASIC1.99□□□□□ -2.09
HMGN4O00479 Y_RNA.510-201ENST00000384511 114 ntBASIC1.99□□□□□ -2.09
HMGN4O00479 MT-TP-201ENST00000387461 68 ntBASIC1.99□□□□□ -2.09
HMGN4O00479 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.99□□□□□ -2.09
HMGN4O00479 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.99□□□□□ -2.09
HMGN4O00479 WARS2P1-201ENST00000429678 537 ntBASIC1.99□□□□□ -2.09
HMGN4O00479 RPL21P104-201ENST00000464143 478 ntBASIC1.99□□□□□ -2.09
HMGN4O00479 AC109486.1-201ENST00000486833 374 ntBASIC1.99□□□□□ -2.09
HMGN4O00479 GTF2IP9-201ENST00000502460 301 ntBASIC1.99□□□□□ -2.09
HMGN4O00479 MTATP6P22-201ENST00000507369 598 ntBASIC1.99□□□□□ -2.09
HMGN4O00479 AC034244.2-201ENST00000514668 858 ntBASIC1.99□□□□□ -2.09
HMGN4O00479 RN7SKP244-201ENST00000516513 307 ntBASIC1.99□□□□□ -2.09
HMGN4O00479 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HMGN4O00479 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.99□□□□□ -2.09
HMGN4O00479 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.99□□□□□ -2.09
HMGN4O00479 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.99□□□□□ -2.09
HMGN4O00479 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.99□□□□□ -2.09
HMGN4O00479 AC090695.1-201ENST00000561269 1222 ntBASIC1.99□□□□□ -2.09
HMGN4O00479 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC1.99□□□□□ -2.09
HMGN4O00479 VN1R81P-201ENST00000602085 372 ntBASIC1.99□□□□□ -2.09
HMGN4O00479 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.99□□□□□ -2.09
HMGN4O00479 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC1.99□□□□□ -2.09
HMGN4O00479 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC1.99□□□□□ -2.09
HMGN4O00479 ZNF33CP-201ENST00000432492 2030 ntBASIC1.99□□□□□ -2.09
HMGN4O00479 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.99□□□□□ -2.09
HMGN4O00479 AC011978.2-201ENST00000569835 2054 ntBASIC1.98□□□□□ -2.09
HMGN4O00479 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HMGN4O00479 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC1.98□□□□□ -2.09
HMGN4O00479 RNU4-53P-201ENST00000410828 140 ntBASIC1.98□□□□□ -2.09
HMGN4O00479 SSXP9-201ENST00000417503 292 ntBASIC1.98□□□□□ -2.09
HMGN4O00479 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.98□□□□□ -2.09
HMGN4O00479 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.98□□□□□ -2.09
HMGN4O00479 AL031659.1-201ENST00000447075 539 ntBASIC1.98□□□□□ -2.09
HMGN4O00479 HSPE1P6-201ENST00000479457 291 ntBASIC1.98□□□□□ -2.09
HMGN4O00479 OR5H5P-201ENST00000503164 928 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms