Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MIR512-1-201ENST00000384913 84 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
UPK1AO00322 RNU1-101P-201ENST00000391171 127 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 SNORA26.7-201ENST00000391288 122 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 UBE2V1P15-201ENST00000407776 448 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.68□□□□□ -1.98
UPK1AO00322 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.68□□□□□ -1.98
UPK1AO00322 VN1R42P-201ENST00000424651 344 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 AC114973.1-201ENST00000429057 632 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 RPL36AP6-201ENST00000435770 321 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 RNFT1P2-201ENST00000443064 757 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 HMGN3P1-201ENST00000453847 193 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.68□□□□□ -1.98
UPK1AO00322 HMGN2P16-201ENST00000456802 261 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.68□□□□□ -1.98
UPK1AO00322 MTCO3P35-201ENST00000485582 781 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.68□□□□□ -1.98
UPK1AO00322 AC083906.5-201ENST00000503722 328 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2.68□□□□□ -1.98
UPK1AO00322 AC010468.3-201ENST00000508225 458 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.68□□□□□ -1.98
UPK1AO00322 SCGB1D5P-201ENST00000515134 247 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 SNORA76.2-201ENST00000517095 137 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 HMGB1P1-201ENST00000522557 636 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.68□□□□□ -1.98
UPK1AO00322 AC239860.2-201ENST00000525886 270 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 OR4A45P-201ENST00000529954 901 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.68□□□□□ -1.98
UPK1AO00322 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.68□□□□□ -1.98
UPK1AO00322 MIR4325-201ENST00000583049 90 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.68□□□□□ -1.98
UPK1AO00322 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.68□□□□□ -1.98
UPK1AO00322 BNIP3P4-201ENST00000604946 565 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 AL513477.2-201ENST00000607858 568 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.68□□□□□ -1.98
UPK1AO00322 AC013468.1-201ENST00000608680 598 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 AL162274.2-201ENST00000614406 332 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 AC002076.2-201ENST00000617362 122 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 AC022509.4-201ENST00000621404 572 ntBASIC2.68□□□□□ -1.98
UPK1AO00322 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
UPK1AO00322 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.68□□□□□ -1.98
UPK1AO00322 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.68□□□□□ -1.98
UPK1AO00322 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
UPK1AO00322 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
UPK1AO00322 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
UPK1AO00322 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
UPK1AO00322 AC096644.4-201ENST00000563417 2912 ntBASIC2.67□□□□□ -1.98
UPK1AO00322 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
UPK1AO00322 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.67□□□□□ -1.98
UPK1AO00322 RNU6-50P-201ENST00000362356 103 ntBASIC2.67□□□□□ -1.98
UPK1AO00322 RNU6-650P-201ENST00000365658 111 ntBASIC2.67□□□□□ -1.98
UPK1AO00322 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.67□□□□□ -1.98
UPK1AO00322 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
UPK1AO00322 RNU6-77P-201ENST00000410554 91 ntBASIC2.67□□□□□ -1.98
UPK1AO00322 AL158825.1-201ENST00000414735 521 ntBASIC2.67□□□□□ -1.98
UPK1AO00322 RPL35AP12-201ENST00000425362 338 ntBASIC2.67□□□□□ -1.98
UPK1AO00322 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.67□□□□□ -1.98
UPK1AO00322 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.67□□□□□ -1.98
UPK1AO00322 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.67□□□□□ -1.98
UPK1AO00322 MRPL50P4-201ENST00000446432 475 ntBASIC2.67□□□□□ -1.98
UPK1AO00322 RPL7P52-201ENST00000449200 742 ntBASIC2.67□□□□□ -1.98
UPK1AO00322 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.67□□□□□ -1.98
UPK1AO00322 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.67□□□□□ -1.98
UPK1AO00322 AC010374.2-201ENST00000512933 535 ntBASIC2.67□□□□□ -1.98
UPK1AO00322 SCARNA13-201ENST00000516672 275 ntBASIC2.67□□□□□ -1.98
UPK1AO00322 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.67□□□□□ -1.98
UPK1AO00322 AL133271.1-201ENST00000538229 291 ntBASIC2.67□□□□□ -1.98
UPK1AO00322 ELOCP31-201ENST00000540463 467 ntBASIC2.67□□□□□ -1.98
UPK1AO00322 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.67□□□□□ -1.98
UPK1AO00322 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.67□□□□□ -1.98
UPK1AO00322 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.67□□□□□ -1.98
UPK1AO00322 AL157394.1-201ENST00000562983 1224 ntBASIC2.67□□□□□ -1.98
UPK1AO00322 LINC00557-201ENST00000563184 1279 ntBASIC2.67□□□□□ -1.98
UPK1AO00322 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.67□□□□□ -1.98
UPK1AO00322 MIR4474-201ENST00000579189 78 ntBASIC2.67□□□□□ -1.98
UPK1AO00322 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.67□□□□□ -1.98
UPK1AO00322 AC005046.1-201ENST00000608515 625 ntBASIC2.67□□□□□ -1.98
UPK1AO00322 AC021851.1-201ENST00000608537 1082 ntBASIC2.67□□□□□ -1.98
UPK1AO00322 AC006963.1-201ENST00000624003 1052 ntBASIC2.67□□□□□ -1.98
UPK1AO00322 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UPK1AO00322 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.67□□□□□ -1.98
UPK1AO00322 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UPK1AO00322 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
UPK1AO00322 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.67□□□□□ -1.98
UPK1AO00322 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
UPK1AO00322 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
UPK1AO00322 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
UPK1AO00322 MTND4P34-201ENST00000572715 1371 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 AC025263.3-201ENST00000622965 1396 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 SNORA70.4-201ENST00000365509 134 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 RNU6-629P-201ENST00000384061 103 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 SNORA48.5-201ENST00000391143 135 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
UPK1AO00322 AC008173.1-201ENST00000418901 264 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 OFD1P18Y-201ENST00000420889 959 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 AC104332.2-201ENST00000429959 156 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.66□□□□□ -1.98
UPK1AO00322 MTCO3P43-201ENST00000440974 771 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 COX6CP2-201ENST00000444980 225 ntBASIC2.66□□□□□ -1.98
UPK1AO00322 RSL24D1P3-201ENST00000449255 495 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms