Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TBC1D3EA0A087X179 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
TBC1D3EA0A087X179 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.14□□□□□ -1.75
TBC1D3EA0A087X179 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
TBC1D3EA0A087X179 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
TBC1D3EA0A087X179 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
TBC1D3EA0A087X179 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TBC1D3EA0A087X179 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
TBC1D3EA0A087X179 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TBC1D3EA0A087X179 MTND4P26-201ENST00000415971 1359 ntBASIC4.14□□□□□ -1.75
TBC1D3EA0A087X179 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 RNU6-263P-201ENST00000363811 107 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 RNU4-6P-201ENST00000410804 122 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 RN7SKP167-201ENST00000411047 285 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AL160275.2-201ENST00000412010 394 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 HSPE1P12-201ENST00000412576 301 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 RPL21P32-201ENST00000419877 477 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 EIF4EP1-201ENST00000422311 642 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 USP9YP14-201ENST00000430663 563 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 RPS29P7-201ENST00000439662 171 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AC006011.1-201ENST00000442758 349 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 FAM103A2P-201ENST00000444122 354 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 USP9YP12-201ENST00000450481 570 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AL353691.1-201ENST00000451332 387 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 SNORA84-201ENST00000459229 133 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 RPS4XP10-201ENST00000465034 731 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AC110792.1-201ENST00000491826 472 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 COX7A2P2-201ENST00000505291 250 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AC020593.1-201ENST00000507399 299 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 SAP18P1-201ENST00000512058 390 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 FTH1P21-201ENST00000512179 511 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 NPM1P41-201ENST00000512920 831 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 RN7SKP116-201ENST00000516902 319 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 RNU6-714P-201ENST00000516963 103 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AC100770.1-201ENST00000532310 322 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 HMGB3P26-201ENST00000560051 582 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AC090615.1-201ENST00000577519 154 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AC005771.1-201ENST00000585581 349 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AC006130.2-201ENST00000586202 326 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AC078795.2-201ENST00000602835 1252 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AL355812.1-201ENST00000603215 216 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AL139286.2-201ENST00000606838 396 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AC104073.3-201ENST00000610942 955 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 AC092447.10-201ENST00000620607 1652 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 FAM91A3P-201ENST00000456826 2544 ntBASIC4.13□□□□□ -1.75
TBC1D3EA0A087X179 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.12□□□□□ -1.75
TBC1D3EA0A087X179 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TBC1D3EA0A087X179 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TBC1D3EA0A087X179 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TBC1D3EA0A087X179 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
TBC1D3EA0A087X179 AC087190.4-201ENST00000574616 8334 ntBASIC4.12□□□□□ -1.75
TBC1D3EA0A087X179 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TBC1D3EA0A087X179 RNA5SP258-201ENST00000362750 119 ntBASIC4.12□□□□□ -1.75
TBC1D3EA0A087X179 RNU6-853P-201ENST00000364306 107 ntBASIC4.12□□□□□ -1.75
TBC1D3EA0A087X179 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TBC1D3EA0A087X179 RNU6-356P-201ENST00000384140 107 ntBASIC4.12□□□□□ -1.75
TBC1D3EA0A087X179 RNU6-533P-201ENST00000384144 107 ntBASIC4.12□□□□□ -1.75
TBC1D3EA0A087X179 SNORD51-201ENST00000384320 80 ntBASIC4.12□□□□□ -1.75
TBC1D3EA0A087X179 RNU6-348P-201ENST00000384386 107 ntBASIC4.12□□□□□ -1.75
TBC1D3EA0A087X179 Y_RNA.548-201ENST00000384656 105 ntBASIC4.12□□□□□ -1.75
TBC1D3EA0A087X179 MIR23B-201ENST00000384832 97 ntBASIC4.12□□□□□ -1.75
TBC1D3EA0A087X179 MIR554-201ENST00000384874 96 ntBASIC4.12□□□□□ -1.75
TBC1D3EA0A087X179 AL356421.1-201ENST00000403255 413 ntBASIC4.12□□□□□ -1.75
TBC1D3EA0A087X179 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.12□□□□□ -1.75
TBC1D3EA0A087X179 AC007899.1-201ENST00000412776 775 ntBASIC4.12□□□□□ -1.75
TBC1D3EA0A087X179 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms