Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.52■■□□□ 1.36
TNFRSF11AQ9Y6Q6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC23.52■■□□□ 1.36
TNFRSF11AQ9Y6Q6 FAM87A-204ENST00000613235 858 ntBASIC23.52■■□□□ 1.36
TNFRSF11AQ9Y6Q6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
TNFRSF11AQ9Y6Q6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
TNFRSF11AQ9Y6Q6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
TNFRSF11AQ9Y6Q6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TNFRSF11AQ9Y6Q6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC23.5■■□□□ 1.35
TNFRSF11AQ9Y6Q6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TNFRSF11AQ9Y6Q6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TNFRSF11AQ9Y6Q6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TNFRSF11AQ9Y6Q6 HIST1H2APS4-201ENST00000362070 348 ntBASIC23.5■■□□□ 1.35
TNFRSF11AQ9Y6Q6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TNFRSF11AQ9Y6Q6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC23.5■■□□□ 1.35
TNFRSF11AQ9Y6Q6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
TNFRSF11AQ9Y6Q6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC23.5■■□□□ 1.35
TNFRSF11AQ9Y6Q6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC23.5■■□□□ 1.35
TNFRSF11AQ9Y6Q6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC23.5■■□□□ 1.35
TNFRSF11AQ9Y6Q6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TNFRSF11AQ9Y6Q6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TNFRSF11AQ9Y6Q6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
TNFRSF11AQ9Y6Q6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TNFRSF11AQ9Y6Q6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TNFRSF11AQ9Y6Q6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC23.49■■□□□ 1.35
TNFRSF11AQ9Y6Q6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.49■■□□□ 1.35
TNFRSF11AQ9Y6Q6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TNFRSF11AQ9Y6Q6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
TNFRSF11AQ9Y6Q6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
TNFRSF11AQ9Y6Q6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TNFRSF11AQ9Y6Q6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC23.49■■□□□ 1.35
TNFRSF11AQ9Y6Q6 AC010203.1-204ENST00000548782 407 ntBASIC23.49■■□□□ 1.35
TNFRSF11AQ9Y6Q6 AC008622.2-201ENST00000617006 1229 ntBASIC23.49■■□□□ 1.35
TNFRSF11AQ9Y6Q6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TNFRSF11AQ9Y6Q6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC23.49■■□□□ 1.35
TNFRSF11AQ9Y6Q6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
TNFRSF11AQ9Y6Q6 AL049812.1-201ENST00000432563 2267 ntBASIC23.49■■□□□ 1.35
TNFRSF11AQ9Y6Q6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.49■■□□□ 1.35
TNFRSF11AQ9Y6Q6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TNFRSF11AQ9Y6Q6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC23.49■■□□□ 1.35
TNFRSF11AQ9Y6Q6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TNFRSF11AQ9Y6Q6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC23.49■■□□□ 1.35
TNFRSF11AQ9Y6Q6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.48■■□□□ 1.35
TNFRSF11AQ9Y6Q6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
TNFRSF11AQ9Y6Q6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC23.48■■□□□ 1.35
TNFRSF11AQ9Y6Q6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC23.48■■□□□ 1.35
TNFRSF11AQ9Y6Q6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
TNFRSF11AQ9Y6Q6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC23.48■■□□□ 1.35
TNFRSF11AQ9Y6Q6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.48■■□□□ 1.35
TNFRSF11AQ9Y6Q6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC23.48■■□□□ 1.35
TNFRSF11AQ9Y6Q6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC23.48■■□□□ 1.35
TNFRSF11AQ9Y6Q6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TNFRSF11AQ9Y6Q6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TNFRSF11AQ9Y6Q6 AC092338.2-201ENST00000568827 1415 ntBASIC23.48■■□□□ 1.35
TNFRSF11AQ9Y6Q6 AC073508.3-201ENST00000619697 1419 ntBASIC23.48■■□□□ 1.35
TNFRSF11AQ9Y6Q6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
TNFRSF11AQ9Y6Q6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TNFRSF11AQ9Y6Q6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TNFRSF11AQ9Y6Q6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC23.48■■□□□ 1.35
TNFRSF11AQ9Y6Q6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TNFRSF11AQ9Y6Q6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TNFRSF11AQ9Y6Q6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TNFRSF11AQ9Y6Q6 FP475955.4-201ENST00000623131 1990 ntBASIC23.47■■□□□ 1.35
TNFRSF11AQ9Y6Q6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TNFRSF11AQ9Y6Q6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC23.47■■□□□ 1.35
TNFRSF11AQ9Y6Q6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TNFRSF11AQ9Y6Q6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.47■■□□□ 1.35
TNFRSF11AQ9Y6Q6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
TNFRSF11AQ9Y6Q6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TNFRSF11AQ9Y6Q6 AC007663.1-201ENST00000438948 1240 ntBASIC23.47■■□□□ 1.35
TNFRSF11AQ9Y6Q6 KRT18P21-201ENST00000515767 1272 ntBASIC23.47■■□□□ 1.35
TNFRSF11AQ9Y6Q6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC23.47■■□□□ 1.35
TNFRSF11AQ9Y6Q6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC23.47■■□□□ 1.35
TNFRSF11AQ9Y6Q6 MIR4674-201ENST00000582457 87 ntBASIC23.47■■□□□ 1.35
TNFRSF11AQ9Y6Q6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TNFRSF11AQ9Y6Q6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC23.47■■□□□ 1.35
TNFRSF11AQ9Y6Q6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TNFRSF11AQ9Y6Q6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TNFRSF11AQ9Y6Q6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC23.47■■□□□ 1.35
TNFRSF11AQ9Y6Q6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms