Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G3Q9Y6M4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CSNK1G3Q9Y6M4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CSNK1G3Q9Y6M4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G3Q9Y6M4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CSNK1G3Q9Y6M4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G3Q9Y6M4 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.77■□□□□ 0.6
CSNK1G3Q9Y6M4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.77■□□□□ 0.6
CSNK1G3Q9Y6M4 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.77■□□□□ 0.6
CSNK1G3Q9Y6M4 AC092647.4-201ENST00000457211 535 ntBASIC18.77■□□□□ 0.6
CSNK1G3Q9Y6M4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G3Q9Y6M4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G3Q9Y6M4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G3Q9Y6M4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G3Q9Y6M4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK1G3Q9Y6M4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.77■□□□□ 0.6
CSNK1G3Q9Y6M4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.77■□□□□ 0.6
CSNK1G3Q9Y6M4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CSNK1G3Q9Y6M4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.77■□□□□ 0.59
CSNK1G3Q9Y6M4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CSNK1G3Q9Y6M4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.77■□□□□ 0.59
CSNK1G3Q9Y6M4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CSNK1G3Q9Y6M4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 HOMER2P1-201ENST00000455653 964 ntBASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 AP003041.3-201ENST00000527151 707 ntBASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 AC011558.1-201ENST00000623459 338 ntBASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.76■□□□□ 0.59
CSNK1G3Q9Y6M4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CSNK1G3Q9Y6M4 KRT8P11-201ENST00000409686 1436 ntBASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 AL031133.1-201ENST00000406807 723 ntBASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CSNK1G3Q9Y6M4 AC140113.3-201ENST00000605663 199 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms