Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX9Q9Y5X1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SNX9Q9Y5X1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX9Q9Y5X1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.55■□□□□ 0.88
SNX9Q9Y5X1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX9Q9Y5X1 ECEL1P3-201ENST00000427961 737 ntBASIC20.55■□□□□ 0.88
SNX9Q9Y5X1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.55■□□□□ 0.88
SNX9Q9Y5X1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SNX9Q9Y5X1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SNX9Q9Y5X1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX9Q9Y5X1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX9Q9Y5X1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SNX9Q9Y5X1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.55■□□□□ 0.88
SNX9Q9Y5X1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX9Q9Y5X1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX9Q9Y5X1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX9Q9Y5X1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
SNX9Q9Y5X1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX9Q9Y5X1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX9Q9Y5X1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX9Q9Y5X1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX9Q9Y5X1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.54■□□□□ 0.88
SNX9Q9Y5X1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX9Q9Y5X1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX9Q9Y5X1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX9Q9Y5X1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX9Q9Y5X1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX9Q9Y5X1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX9Q9Y5X1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.54■□□□□ 0.88
SNX9Q9Y5X1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.54■□□□□ 0.88
SNX9Q9Y5X1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SNX9Q9Y5X1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX9Q9Y5X1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.54■□□□□ 0.88
SNX9Q9Y5X1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.54■□□□□ 0.88
SNX9Q9Y5X1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX9Q9Y5X1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SNX9Q9Y5X1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX9Q9Y5X1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 KRT8P11-201ENST00000409686 1436 ntBASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 NAPSB-206ENST00000562112 1266 ntBASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX9Q9Y5X1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX9Q9Y5X1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX9Q9Y5X1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.52■□□□□ 0.88
SNX9Q9Y5X1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX9Q9Y5X1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.52■□□□□ 0.88
SNX9Q9Y5X1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX9Q9Y5X1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX9Q9Y5X1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX9Q9Y5X1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNX9Q9Y5X1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.52■□□□□ 0.88
SNX9Q9Y5X1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNX9Q9Y5X1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SNX9Q9Y5X1 LINC01023-201ENST00000606054 436 ntBASIC20.52■□□□□ 0.88
SNX9Q9Y5X1 AC010947.1-201ENST00000623454 693 ntBASIC20.52■□□□□ 0.88
SNX9Q9Y5X1 AC007952.6-201ENST00000573168 2673 ntBASIC20.52■□□□□ 0.88
SNX9Q9Y5X1 AC003957.1-201ENST00000625108 2673 ntBASIC20.52■□□□□ 0.88
SNX9Q9Y5X1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX9Q9Y5X1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX9Q9Y5X1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.52■□□□□ 0.88
SNX9Q9Y5X1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SNX9Q9Y5X1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SNX9Q9Y5X1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.52■□□□□ 0.87
SNX9Q9Y5X1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SNX9Q9Y5X1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.51■□□□□ 0.87
SNX9Q9Y5X1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX9Q9Y5X1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SNX9Q9Y5X1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.51■□□□□ 0.87
SNX9Q9Y5X1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNX9Q9Y5X1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.51■□□□□ 0.87
SNX9Q9Y5X1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SNX9Q9Y5X1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX9Q9Y5X1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.51■□□□□ 0.87
SNX9Q9Y5X1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.51■□□□□ 0.87
SNX9Q9Y5X1 CKBP1-201ENST00000565489 1086 ntBASIC20.51■□□□□ 0.87
SNX9Q9Y5X1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX9Q9Y5X1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX9Q9Y5X1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX9Q9Y5X1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX9Q9Y5X1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX9Q9Y5X1 AC093484.2-201ENST00000580996 2166 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms