Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
CHD7Q9P2D1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD7Q9P2D1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD7Q9P2D1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD7Q9P2D1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD7Q9P2D1 DRAXINP1-201ENST00000437611 948 ntBASIC20.38■□□□□ 0.85
CHD7Q9P2D1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
CHD7Q9P2D1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD7Q9P2D1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD7Q9P2D1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CHD7Q9P2D1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD7Q9P2D1 GPAT2P1-201ENST00000444924 1672 ntBASIC20.38■□□□□ 0.85
CHD7Q9P2D1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD7Q9P2D1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CHD7Q9P2D1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.38■□□□□ 0.85
CHD7Q9P2D1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.38■□□□□ 0.85
CHD7Q9P2D1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CHD7Q9P2D1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD7Q9P2D1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD7Q9P2D1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHD7Q9P2D1 KRT18P13-201ENST00000400056 1290 ntBASIC20.37■□□□□ 0.85
CHD7Q9P2D1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.37■□□□□ 0.85
CHD7Q9P2D1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CHD7Q9P2D1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.37■□□□□ 0.85
CHD7Q9P2D1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CHD7Q9P2D1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHD7Q9P2D1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.37■□□□□ 0.85
CHD7Q9P2D1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.37■□□□□ 0.85
CHD7Q9P2D1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHD7Q9P2D1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHD7Q9P2D1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.37■□□□□ 0.85
CHD7Q9P2D1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.37■□□□□ 0.85
CHD7Q9P2D1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CHD7Q9P2D1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.37■□□□□ 0.85
CHD7Q9P2D1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD7Q9P2D1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD7Q9P2D1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.37■□□□□ 0.85
CHD7Q9P2D1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD7Q9P2D1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD7Q9P2D1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.36■□□□□ 0.85
CHD7Q9P2D1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.36■□□□□ 0.85
CHD7Q9P2D1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD7Q9P2D1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD7Q9P2D1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD7Q9P2D1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.36■□□□□ 0.85
CHD7Q9P2D1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CHD7Q9P2D1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHD7Q9P2D1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHD7Q9P2D1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.36■□□□□ 0.85
CHD7Q9P2D1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD7Q9P2D1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD7Q9P2D1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHD7Q9P2D1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.36■□□□□ 0.85
CHD7Q9P2D1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.36■□□□□ 0.85
CHD7Q9P2D1 AC091304.2-201ENST00000564639 760 ntBASIC20.36■□□□□ 0.85
CHD7Q9P2D1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD7Q9P2D1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.36■□□□□ 0.85
CHD7Q9P2D1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHD7Q9P2D1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.35■□□□□ 0.85
CHD7Q9P2D1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.35■□□□□ 0.85
CHD7Q9P2D1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.35■□□□□ 0.85
CHD7Q9P2D1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHD7Q9P2D1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD7Q9P2D1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CHD7Q9P2D1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.35■□□□□ 0.85
CHD7Q9P2D1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHD7Q9P2D1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHD7Q9P2D1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD7Q9P2D1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD7Q9P2D1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
CHD7Q9P2D1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.35■□□□□ 0.85
CHD7Q9P2D1 IL9RP2-201ENST00000423948 1312 ntBASIC20.35■□□□□ 0.85
CHD7Q9P2D1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD7Q9P2D1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 AC079776.4-201ENST00000511039 504 ntBASIC20.34■□□□□ 0.85
CHD7Q9P2D1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 KRT8P26-201ENST00000534154 1276 ntBASIC20.34■□□□□ 0.85
CHD7Q9P2D1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CHD7Q9P2D1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHD7Q9P2D1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHD7Q9P2D1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CHD7Q9P2D1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms