Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.95■□□□□ 0.14
LIN7CQ9NUP9 AL161938.1-201ENST00000569833 2180 ntBASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LIN7CQ9NUP9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 UNC93B5-201ENST00000530315 699 ntBASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LIN7CQ9NUP9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
LIN7CQ9NUP9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms