Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.62■□□□□ 0.41
SDHAF3Q9NRP4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.62■□□□□ 0.41
SDHAF3Q9NRP4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SDHAF3Q9NRP4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.62■□□□□ 0.41
SDHAF3Q9NRP4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.62■□□□□ 0.41
SDHAF3Q9NRP4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SDHAF3Q9NRP4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.62■□□□□ 0.41
SDHAF3Q9NRP4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SDHAF3Q9NRP4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SDHAF3Q9NRP4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SDHAF3Q9NRP4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SDHAF3Q9NRP4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SDHAF3Q9NRP4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SDHAF3Q9NRP4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.62■□□□□ 0.41
SDHAF3Q9NRP4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SDHAF3Q9NRP4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SDHAF3Q9NRP4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SDHAF3Q9NRP4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SDHAF3Q9NRP4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 NUDT16P1-203ENST00000513809 620 ntBASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SDHAF3Q9NRP4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 AC004951.3-201ENST00000418645 1148 ntBASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 MIR4497-201ENST00000583208 89 ntBASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 AC026471.5-201ENST00000615068 467 ntBASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.6■□□□□ 0.41
SDHAF3Q9NRP4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 SNORA78-201ENST00000459373 127 ntBASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SDHAF3Q9NRP4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms