Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.48■■□□□ 1.03
VTA1Q9NP79 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VTA1Q9NP79 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VTA1Q9NP79 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.48■■□□□ 1.03
VTA1Q9NP79 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
VTA1Q9NP79 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
VTA1Q9NP79 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.48■■□□□ 1.03
VTA1Q9NP79 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.48■■□□□ 1.03
VTA1Q9NP79 VENTXP5-201ENST00000523979 775 ntBASIC21.48■■□□□ 1.03
VTA1Q9NP79 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.48■■□□□ 1.03
VTA1Q9NP79 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.48■■□□□ 1.03
VTA1Q9NP79 ZNF444P1-201ENST00000559497 298 ntBASIC21.48■■□□□ 1.03
VTA1Q9NP79 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VTA1Q9NP79 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
VTA1Q9NP79 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VTA1Q9NP79 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VTA1Q9NP79 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
VTA1Q9NP79 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VTA1Q9NP79 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
VTA1Q9NP79 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
VTA1Q9NP79 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VTA1Q9NP79 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VTA1Q9NP79 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
VTA1Q9NP79 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VTA1Q9NP79 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VTA1Q9NP79 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.47■■□□□ 1.03
VTA1Q9NP79 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.47■■□□□ 1.03
VTA1Q9NP79 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.47■■□□□ 1.03
VTA1Q9NP79 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
VTA1Q9NP79 SDHAP1-207ENST00000440850 2000 ntBASIC21.47■■□□□ 1.03
VTA1Q9NP79 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
VTA1Q9NP79 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.47■■□□□ 1.03
VTA1Q9NP79 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VTA1Q9NP79 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VTA1Q9NP79 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.47■■□□□ 1.03
VTA1Q9NP79 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.47■■□□□ 1.03
VTA1Q9NP79 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VTA1Q9NP79 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VTA1Q9NP79 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VTA1Q9NP79 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.47■■□□□ 1.03
VTA1Q9NP79 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.47■■□□□ 1.03
VTA1Q9NP79 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.47■■□□□ 1.03
VTA1Q9NP79 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.47■■□□□ 1.03
VTA1Q9NP79 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTA1Q9NP79 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTA1Q9NP79 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VTA1Q9NP79 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTA1Q9NP79 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
VTA1Q9NP79 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.46■■□□□ 1.03
VTA1Q9NP79 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.46■■□□□ 1.03
VTA1Q9NP79 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.46■■□□□ 1.03
VTA1Q9NP79 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTA1Q9NP79 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTA1Q9NP79 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.46■■□□□ 1.03
VTA1Q9NP79 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTA1Q9NP79 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTA1Q9NP79 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VTA1Q9NP79 SPDYE15P-201ENST00000424157 909 ntBASIC21.46■■□□□ 1.03
VTA1Q9NP79 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTA1Q9NP79 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
VTA1Q9NP79 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.46■■□□□ 1.03
VTA1Q9NP79 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTA1Q9NP79 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VTA1Q9NP79 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.46■■□□□ 1.03
VTA1Q9NP79 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTA1Q9NP79 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTA1Q9NP79 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
VTA1Q9NP79 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VTA1Q9NP79 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTA1Q9NP79 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
VTA1Q9NP79 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.45■■□□□ 1.02
VTA1Q9NP79 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VTA1Q9NP79 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VTA1Q9NP79 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VTA1Q9NP79 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
VTA1Q9NP79 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VTA1Q9NP79 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.45■■□□□ 1.02
VTA1Q9NP79 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VTA1Q9NP79 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.45■■□□□ 1.02
VTA1Q9NP79 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.45■■□□□ 1.02
VTA1Q9NP79 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.45■■□□□ 1.02
VTA1Q9NP79 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VTA1Q9NP79 AC093458.2-201ENST00000623150 629 ntBASIC21.45■■□□□ 1.02
VTA1Q9NP79 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.45■■□□□ 1.02
VTA1Q9NP79 LINC01311-201ENST00000565162 1445 ntBASIC21.45■■□□□ 1.02
VTA1Q9NP79 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VTA1Q9NP79 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
VTA1Q9NP79 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.44■■□□□ 1.02
VTA1Q9NP79 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.44■■□□□ 1.02
VTA1Q9NP79 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
VTA1Q9NP79 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
VTA1Q9NP79 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
VTA1Q9NP79 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VTA1Q9NP79 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.44■■□□□ 1.02
VTA1Q9NP79 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VTA1Q9NP79 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VTA1Q9NP79 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
VTA1Q9NP79 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VTA1Q9NP79 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.44■■□□□ 1.02
VTA1Q9NP79 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms