Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 CROCCP3-202ENST00000420820 1947 ntBASIC18.35■□□□□ 0.53
BRF2Q9HAW0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 AC073648.6-201ENST00000641589 218 ntBASIC18.35■□□□□ 0.53
BRF2Q9HAW0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.35■□□□□ 0.53
BRF2Q9HAW0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 CD99P1-205ENST00000527459 561 ntBASIC18.34■□□□□ 0.53
BRF2Q9HAW0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 AC006058.3-201ENST00000606217 1069 ntBASIC18.34■□□□□ 0.53
BRF2Q9HAW0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.34■□□□□ 0.53
BRF2Q9HAW0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.33■□□□□ 0.53
BRF2Q9HAW0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.33■□□□□ 0.53
BRF2Q9HAW0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
BRF2Q9HAW0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRF2Q9HAW0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
BRF2Q9HAW0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BRF2Q9HAW0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.33■□□□□ 0.53
BRF2Q9HAW0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
BRF2Q9HAW0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BRF2Q9HAW0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BRF2Q9HAW0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
BRF2Q9HAW0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
BRF2Q9HAW0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRF2Q9HAW0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.33■□□□□ 0.52
BRF2Q9HAW0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.33■□□□□ 0.52
BRF2Q9HAW0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.33■□□□□ 0.52
BRF2Q9HAW0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.33■□□□□ 0.52
BRF2Q9HAW0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.33■□□□□ 0.52
BRF2Q9HAW0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.33■□□□□ 0.52
BRF2Q9HAW0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.33■□□□□ 0.52
BRF2Q9HAW0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.33■□□□□ 0.52
BRF2Q9HAW0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BRF2Q9HAW0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRF2Q9HAW0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRF2Q9HAW0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BRF2Q9HAW0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRF2Q9HAW0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BRF2Q9HAW0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
BRF2Q9HAW0 AL445675.2-201ENST00000620291 557 ntBASIC18.32■□□□□ 0.52
BRF2Q9HAW0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms