Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AL662844.1-201ENST00000546340 181 ntBASIC16.15■□□□□ 0.18
FOXC2Q99958 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXC2Q99958 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXC2Q99958 AP002414.4-201ENST00000589764 1148 ntBASIC16.15■□□□□ 0.18
FOXC2Q99958 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXC2Q99958 AC244015.2-201ENST00000616358 1861 ntBASIC16.15■□□□□ 0.18
FOXC2Q99958 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
FOXC2Q99958 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.15■□□□□ 0.18
FOXC2Q99958 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXC2Q99958 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXC2Q99958 AL049796.1-201ENST00000565336 1766 ntBASIC16.15■□□□□ 0.18
FOXC2Q99958 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXC2Q99958 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXC2Q99958 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXC2Q99958 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
FOXC2Q99958 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
FOXC2Q99958 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXC2Q99958 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXC2Q99958 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXC2Q99958 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXC2Q99958 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXC2Q99958 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXC2Q99958 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
FOXC2Q99958 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXC2Q99958 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXC2Q99958 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXC2Q99958 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.14■□□□□ 0.17
FOXC2Q99958 AC091304.2-201ENST00000564639 760 ntBASIC16.14■□□□□ 0.17
FOXC2Q99958 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.14■□□□□ 0.17
FOXC2Q99958 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.14■□□□□ 0.17
FOXC2Q99958 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.14■□□□□ 0.17
FOXC2Q99958 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.14■□□□□ 0.17
FOXC2Q99958 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXC2Q99958 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.14■□□□□ 0.17
FOXC2Q99958 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.14■□□□□ 0.17
FOXC2Q99958 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXC2Q99958 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXC2Q99958 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
FOXC2Q99958 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXC2Q99958 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
FOXC2Q99958 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
FOXC2Q99958 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXC2Q99958 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXC2Q99958 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
FOXC2Q99958 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FOXC2Q99958 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.13■□□□□ 0.17
FOXC2Q99958 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXC2Q99958 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXC2Q99958 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXC2Q99958 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXC2Q99958 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXC2Q99958 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FOXC2Q99958 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXC2Q99958 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
FOXC2Q99958 KRT8P26-201ENST00000534154 1276 ntBASIC16.13■□□□□ 0.17
FOXC2Q99958 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXC2Q99958 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.13■□□□□ 0.17
FOXC2Q99958 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXC2Q99958 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
FOXC2Q99958 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.13■□□□□ 0.17
FOXC2Q99958 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXC2Q99958 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
FOXC2Q99958 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
FOXC2Q99958 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FOXC2Q99958 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXC2Q99958 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
FOXC2Q99958 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXC2Q99958 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXC2Q99958 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXC2Q99958 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FOXC2Q99958 KRT18P1-202ENST00000452408 1331 ntBASIC16.13■□□□□ 0.17
FOXC2Q99958 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.13■□□□□ 0.17
FOXC2Q99958 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXC2Q99958 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
FOXC2Q99958 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
FOXC2Q99958 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXC2Q99958 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.13■□□□□ 0.17
FOXC2Q99958 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXC2Q99958 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
FOXC2Q99958 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXC2Q99958 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXC2Q99958 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXC2Q99958 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXC2Q99958 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXC2Q99958 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
FOXC2Q99958 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXC2Q99958 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXC2Q99958 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXC2Q99958 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.12■□□□□ 0.17
FOXC2Q99958 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
FOXC2Q99958 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
FOXC2Q99958 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
FOXC2Q99958 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXC2Q99958 AC092597.1-201ENST00000487352 616 ntBASIC16.12■□□□□ 0.17
FOXC2Q99958 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
FOXC2Q99958 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
FOXC2Q99958 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
FOXC2Q99958 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.12■□□□□ 0.17
FOXC2Q99958 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
FOXC2Q99958 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms