Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SPENQ96T58 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.32■□□□□ 0.36
SPENQ96T58 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SPENQ96T58 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPENQ96T58 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPENQ96T58 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPENQ96T58 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SPENQ96T58 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPENQ96T58 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPENQ96T58 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.32■□□□□ 0.36
SPENQ96T58 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SPENQ96T58 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SPENQ96T58 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPENQ96T58 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SPENQ96T58 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.32■□□□□ 0.36
SPENQ96T58 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SPENQ96T58 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SPENQ96T58 AC006538.3-201ENST00000612495 578 ntBASIC17.32■□□□□ 0.36
SPENQ96T58 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
SPENQ96T58 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPENQ96T58 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SPENQ96T58 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.32■□□□□ 0.36
SPENQ96T58 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPENQ96T58 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.32■□□□□ 0.36
SPENQ96T58 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SPENQ96T58 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SPENQ96T58 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.31■□□□□ 0.36
SPENQ96T58 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPENQ96T58 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPENQ96T58 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPENQ96T58 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SPENQ96T58 AC011498.5-201ENST00000592027 486 ntBASIC17.31■□□□□ 0.36
SPENQ96T58 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.31■□□□□ 0.36
SPENQ96T58 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SPENQ96T58 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SPENQ96T58 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPENQ96T58 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPENQ96T58 KRT18P1-202ENST00000452408 1331 ntBASIC17.31■□□□□ 0.36
SPENQ96T58 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SPENQ96T58 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.31■□□□□ 0.36
SPENQ96T58 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPENQ96T58 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPENQ96T58 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.31■□□□□ 0.36
SPENQ96T58 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.31■□□□□ 0.36
SPENQ96T58 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SPENQ96T58 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPENQ96T58 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPENQ96T58 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SPENQ96T58 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPENQ96T58 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPENQ96T58 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPENQ96T58 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPENQ96T58 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.31■□□□□ 0.36
SPENQ96T58 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.31■□□□□ 0.36
SPENQ96T58 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.3■□□□□ 0.36
SPENQ96T58 SDHAP1-207ENST00000440850 2000 ntBASIC17.3■□□□□ 0.36
SPENQ96T58 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SPENQ96T58 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPENQ96T58 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SPENQ96T58 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SPENQ96T58 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.3■□□□□ 0.36
SPENQ96T58 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SPENQ96T58 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SPENQ96T58 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.3■□□□□ 0.36
SPENQ96T58 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SPENQ96T58 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPENQ96T58 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.3■□□□□ 0.36
SPENQ96T58 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPENQ96T58 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.3■□□□□ 0.36
SPENQ96T58 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SPENQ96T58 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.3■□□□□ 0.36
SPENQ96T58 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.3■□□□□ 0.36
SPENQ96T58 KRT8P8-201ENST00000434750 1448 ntBASIC17.3■□□□□ 0.36
SPENQ96T58 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.3■□□□□ 0.36
SPENQ96T58 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPENQ96T58 AP005901.3-202ENST00000581653 237 ntBASIC17.29■□□□□ 0.36
SPENQ96T58 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.29■□□□□ 0.36
SPENQ96T58 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SPENQ96T58 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPENQ96T58 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPENQ96T58 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SPENQ96T58 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPENQ96T58 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPENQ96T58 AC104417.2-201ENST00000562989 1793 ntBASIC17.29■□□□□ 0.36
SPENQ96T58 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SPENQ96T58 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPENQ96T58 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.29■□□□□ 0.36
SPENQ96T58 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPENQ96T58 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPENQ96T58 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.29■□□□□ 0.36
SPENQ96T58 AC139530.3-201ENST00000620344 690 ntBASIC17.29■□□□□ 0.36
SPENQ96T58 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.29■□□□□ 0.36
SPENQ96T58 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPENQ96T58 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.29■□□□□ 0.36
SPENQ96T58 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SPENQ96T58 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPENQ96T58 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPENQ96T58 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SPENQ96T58 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPENQ96T58 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms