Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTNAP3BQ96NU0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNTNAP3BQ96NU0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.33■□□□□ 0.53
CNTNAP3BQ96NU0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CNTNAP3BQ96NU0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNTNAP3BQ96NU0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNTNAP3BQ96NU0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.33■□□□□ 0.53
CNTNAP3BQ96NU0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CNTNAP3BQ96NU0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CNTNAP3BQ96NU0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CNTNAP3BQ96NU0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CNTNAP3BQ96NU0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNTNAP3BQ96NU0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CNTNAP3BQ96NU0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNTNAP3BQ96NU0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNTNAP3BQ96NU0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.33■□□□□ 0.52
CNTNAP3BQ96NU0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNTNAP3BQ96NU0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CNTNAP3BQ96NU0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.33■□□□□ 0.52
CNTNAP3BQ96NU0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.33■□□□□ 0.52
CNTNAP3BQ96NU0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.33■□□□□ 0.52
CNTNAP3BQ96NU0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.33■□□□□ 0.52
CNTNAP3BQ96NU0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.33■□□□□ 0.52
CNTNAP3BQ96NU0 AC092364.2-202ENST00000597012 1073 ntBASIC18.33■□□□□ 0.52
CNTNAP3BQ96NU0 AC138894.3-201ENST00000603787 634 ntBASIC18.33■□□□□ 0.52
CNTNAP3BQ96NU0 AL773604.1-201ENST00000617417 272 ntBASIC18.33■□□□□ 0.52
CNTNAP3BQ96NU0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNTNAP3BQ96NU0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNTNAP3BQ96NU0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 AC112497.1-201ENST00000624824 639 ntBASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 AC083906.6-201ENST00000641366 219 ntBASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 AC079781.4-201ENST00000641908 219 ntBASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.32■□□□□ 0.52
CNTNAP3BQ96NU0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.31■□□□□ 0.52
CNTNAP3BQ96NU0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.31■□□□□ 0.52
CNTNAP3BQ96NU0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP3BQ96NU0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.31■□□□□ 0.52
CNTNAP3BQ96NU0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.31■□□□□ 0.52
CNTNAP3BQ96NU0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.31■□□□□ 0.52
CNTNAP3BQ96NU0 UPF3AP3-201ENST00000420996 769 ntBASIC18.31■□□□□ 0.52
CNTNAP3BQ96NU0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.31■□□□□ 0.52
CNTNAP3BQ96NU0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.31■□□□□ 0.52
CNTNAP3BQ96NU0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CNTNAP3BQ96NU0 CA15P1-201ENST00000481698 905 ntBASIC18.31■□□□□ 0.52
CNTNAP3BQ96NU0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP3BQ96NU0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
CNTNAP3BQ96NU0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP3BQ96NU0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP3BQ96NU0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CNTNAP3BQ96NU0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CNTNAP3BQ96NU0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP3BQ96NU0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP3BQ96NU0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.31■□□□□ 0.52
CNTNAP3BQ96NU0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 AC010327.4-202ENST00000591484 748 ntBASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP3BQ96NU0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms