Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.27■□□□□ 0.19
SPG11Q96JI7 AC106795.1-205ENST00000512851 1056 ntBASIC16.27■□□□□ 0.19
SPG11Q96JI7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SPG11Q96JI7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SPG11Q96JI7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.27■□□□□ 0.19
SPG11Q96JI7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SPG11Q96JI7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.26■□□□□ 0.19
SPG11Q96JI7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SPG11Q96JI7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SPG11Q96JI7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.26■□□□□ 0.19
SPG11Q96JI7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SPG11Q96JI7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SPG11Q96JI7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SPG11Q96JI7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPG11Q96JI7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SPG11Q96JI7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPG11Q96JI7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPG11Q96JI7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SPG11Q96JI7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.26■□□□□ 0.19
SPG11Q96JI7 NUS1P1-201ENST00000446295 882 ntBASIC16.26■□□□□ 0.19
SPG11Q96JI7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.26■□□□□ 0.19
SPG11Q96JI7 BX276092.5-203ENST00000456199 560 ntBASIC16.26■□□□□ 0.19
SPG11Q96JI7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SPG11Q96JI7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPG11Q96JI7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPG11Q96JI7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
SPG11Q96JI7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPG11Q96JI7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPG11Q96JI7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.26■□□□□ 0.19
SPG11Q96JI7 KRT8P11-201ENST00000409686 1436 ntBASIC16.26■□□□□ 0.19
SPG11Q96JI7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SPG11Q96JI7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.26■□□□□ 0.19
SPG11Q96JI7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SPG11Q96JI7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPG11Q96JI7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.26■□□□□ 0.19
SPG11Q96JI7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPG11Q96JI7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.26■□□□□ 0.19
SPG11Q96JI7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.26■□□□□ 0.19
SPG11Q96JI7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPG11Q96JI7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPG11Q96JI7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SPG11Q96JI7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.26■□□□□ 0.19
SPG11Q96JI7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.25■□□□□ 0.19
SPG11Q96JI7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.25■□□□□ 0.19
SPG11Q96JI7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SPG11Q96JI7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SPG11Q96JI7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPG11Q96JI7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SPG11Q96JI7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.25■□□□□ 0.19
SPG11Q96JI7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPG11Q96JI7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.25■□□□□ 0.19
SPG11Q96JI7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.25■□□□□ 0.19
SPG11Q96JI7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.25■□□□□ 0.19
SPG11Q96JI7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.25■□□□□ 0.19
SPG11Q96JI7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPG11Q96JI7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPG11Q96JI7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SPG11Q96JI7 KRT16P4-201ENST00000453883 522 ntBASIC16.25■□□□□ 0.19
SPG11Q96JI7 AC092183.1-201ENST00000469884 875 ntBASIC16.25■□□□□ 0.19
SPG11Q96JI7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.25■□□□□ 0.19
SPG11Q96JI7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.25■□□□□ 0.19
SPG11Q96JI7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPG11Q96JI7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPG11Q96JI7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.25■□□□□ 0.19
SPG11Q96JI7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPG11Q96JI7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SPG11Q96JI7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPG11Q96JI7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SPG11Q96JI7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SPG11Q96JI7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPG11Q96JI7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
SPG11Q96JI7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPG11Q96JI7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPG11Q96JI7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.24■□□□□ 0.19
SPG11Q96JI7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPG11Q96JI7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.24■□□□□ 0.19
SPG11Q96JI7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SPG11Q96JI7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
SPG11Q96JI7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPG11Q96JI7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SPG11Q96JI7 HLA-A-201ENST00000376802 1334 ntBASIC16.24■□□□□ 0.19
SPG11Q96JI7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPG11Q96JI7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPG11Q96JI7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SPG11Q96JI7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.24■□□□□ 0.19
SPG11Q96JI7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.24■□□□□ 0.19
SPG11Q96JI7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
SPG11Q96JI7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPG11Q96JI7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SPG11Q96JI7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.24■□□□□ 0.19
SPG11Q96JI7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.24■□□□□ 0.19
SPG11Q96JI7 AC079781.3-201ENST00000449110 356 ntBASIC16.24■□□□□ 0.19
SPG11Q96JI7 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.24■□□□□ 0.19
SPG11Q96JI7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.24■□□□□ 0.19
SPG11Q96JI7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.24■□□□□ 0.19
SPG11Q96JI7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.24■□□□□ 0.19
SPG11Q96JI7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPG11Q96JI7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPG11Q96JI7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.23■□□□□ 0.19
SPG11Q96JI7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms