Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 AC116562.2-201ENST00000507042 360 ntBASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 CR392000.1-201ENST00000624770 1228 ntBASIC19.59■□□□□ 0.73
SHROOM3Q8TF72 AC098818.2-201ENST00000564925 2320 ntBASIC19.58■□□□□ 0.73
SHROOM3Q8TF72 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHROOM3Q8TF72 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
SHROOM3Q8TF72 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHROOM3Q8TF72 AL135905.2-201ENST00000584934 1404 ntBASIC19.58■□□□□ 0.73
SHROOM3Q8TF72 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.58■□□□□ 0.73
SHROOM3Q8TF72 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHROOM3Q8TF72 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.58■□□□□ 0.73
SHROOM3Q8TF72 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.58■□□□□ 0.73
SHROOM3Q8TF72 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHROOM3Q8TF72 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SHROOM3Q8TF72 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.58■□□□□ 0.73
SHROOM3Q8TF72 AC012306.2-201ENST00000609350 630 ntBASIC19.58■□□□□ 0.73
SHROOM3Q8TF72 AC113410.3-201ENST00000623366 203 ntBASIC19.58■□□□□ 0.73
SHROOM3Q8TF72 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHROOM3Q8TF72 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.58■□□□□ 0.72
SHROOM3Q8TF72 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHROOM3Q8TF72 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.58■□□□□ 0.72
SHROOM3Q8TF72 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHROOM3Q8TF72 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SHROOM3Q8TF72 KRT17P2-201ENST00000300992 1314 ntBASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 FAM197Y1-201ENST00000421178 764 ntBASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 TSPY7P-201ENST00000431358 1114 ntBASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 AC073195.1-201ENST00000607241 877 ntBASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 MIR6786-201ENST00000616843 113 ntBASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHROOM3Q8TF72 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 AC006333.2-201ENST00000607957 2099 ntBASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.56■□□□□ 0.72
SHROOM3Q8TF72 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms