Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBA3Q8TBC4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.33■□□□□ 0.85
UBA3Q8TBC4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.33■□□□□ 0.85
UBA3Q8TBC4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBA3Q8TBC4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBA3Q8TBC4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBA3Q8TBC4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBA3Q8TBC4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBA3Q8TBC4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBA3Q8TBC4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.33■□□□□ 0.85
UBA3Q8TBC4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
UBA3Q8TBC4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBA3Q8TBC4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBA3Q8TBC4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
UBA3Q8TBC4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBA3Q8TBC4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBA3Q8TBC4 B3GAT3P1-201ENST00000471720 806 ntBASIC20.33■□□□□ 0.85
UBA3Q8TBC4 AP003071.4-201ENST00000562276 1284 ntBASIC20.33■□□□□ 0.85
UBA3Q8TBC4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.33■□□□□ 0.85
UBA3Q8TBC4 REXO1L10P-201ENST00000615707 1290 ntBASIC20.33■□□□□ 0.85
UBA3Q8TBC4 AC011298.2-201ENST00000617989 482 ntBASIC20.33■□□□□ 0.85
UBA3Q8TBC4 REXO1L12P-201ENST00000622156 912 ntBASIC20.33■□□□□ 0.85
UBA3Q8TBC4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBA3Q8TBC4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.33■□□□□ 0.84
UBA3Q8TBC4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBA3Q8TBC4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
UBA3Q8TBC4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBA3Q8TBC4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBA3Q8TBC4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBA3Q8TBC4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 AC004951.3-201ENST00000418645 1148 ntBASIC20.32■□□□□ 0.84
UBA3Q8TBC4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 AC130371.2-201ENST00000619443 611 ntBASIC20.32■□□□□ 0.84
UBA3Q8TBC4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBA3Q8TBC4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 AC116562.2-201ENST00000507042 360 ntBASIC20.31■□□□□ 0.84
UBA3Q8TBC4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 AC026271.3-201ENST00000571884 352 ntBASIC20.31■□□□□ 0.84
UBA3Q8TBC4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBA3Q8TBC4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBA3Q8TBC4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.3■□□□□ 0.84
UBA3Q8TBC4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
UBA3Q8TBC4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBA3Q8TBC4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBA3Q8TBC4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBA3Q8TBC4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBA3Q8TBC4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBA3Q8TBC4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBA3Q8TBC4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.3■□□□□ 0.84
UBA3Q8TBC4 TSPY15P-201ENST00000457163 923 ntBASIC20.3■□□□□ 0.84
UBA3Q8TBC4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.3■□□□□ 0.84
UBA3Q8TBC4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.3■□□□□ 0.84
UBA3Q8TBC4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.3■□□□□ 0.84
UBA3Q8TBC4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms