Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.64■□□□□ 0.73
SIX5Q8N196 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIX5Q8N196 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.64■□□□□ 0.73
SIX5Q8N196 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.64■□□□□ 0.73
SIX5Q8N196 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIX5Q8N196 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIX5Q8N196 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIX5Q8N196 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIX5Q8N196 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SIX5Q8N196 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIX5Q8N196 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIX5Q8N196 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SIX5Q8N196 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIX5Q8N196 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.63■□□□□ 0.73
SIX5Q8N196 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SIX5Q8N196 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SIX5Q8N196 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIX5Q8N196 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIX5Q8N196 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.63■□□□□ 0.73
SIX5Q8N196 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.63■□□□□ 0.73
SIX5Q8N196 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.63■□□□□ 0.73
SIX5Q8N196 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SIX5Q8N196 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.63■□□□□ 0.73
SIX5Q8N196 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SIX5Q8N196 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIX5Q8N196 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.63■□□□□ 0.73
SIX5Q8N196 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.63■□□□□ 0.73
SIX5Q8N196 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIX5Q8N196 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIX5Q8N196 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIX5Q8N196 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIX5Q8N196 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SIX5Q8N196 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.62■□□□□ 0.73
SIX5Q8N196 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIX5Q8N196 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.62■□□□□ 0.73
SIX5Q8N196 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SIX5Q8N196 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.62■□□□□ 0.73
SIX5Q8N196 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIX5Q8N196 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.62■□□□□ 0.73
SIX5Q8N196 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.62■□□□□ 0.73
SIX5Q8N196 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIX5Q8N196 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.62■□□□□ 0.73
SIX5Q8N196 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.62■□□□□ 0.73
SIX5Q8N196 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.62■□□□□ 0.73
SIX5Q8N196 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIX5Q8N196 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SIX5Q8N196 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIX5Q8N196 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
SIX5Q8N196 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.62■□□□□ 0.73
SIX5Q8N196 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SIX5Q8N196 AC023511.2-201ENST00000618803 211 ntBASIC19.62■□□□□ 0.73
SIX5Q8N196 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIX5Q8N196 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIX5Q8N196 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIX5Q8N196 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.62■□□□□ 0.73
SIX5Q8N196 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SIX5Q8N196 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SIX5Q8N196 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIX5Q8N196 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.62■□□□□ 0.73
SIX5Q8N196 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIX5Q8N196 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.61■□□□□ 0.73
SIX5Q8N196 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SIX5Q8N196 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIX5Q8N196 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIX5Q8N196 FEM1AP4-201ENST00000443167 1987 ntBASIC19.61■□□□□ 0.73
SIX5Q8N196 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.61■□□□□ 0.73
SIX5Q8N196 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SIX5Q8N196 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
SIX5Q8N196 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.61■□□□□ 0.73
SIX5Q8N196 BX276092.5-203ENST00000456199 560 ntBASIC19.61■□□□□ 0.73
SIX5Q8N196 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.61■□□□□ 0.73
SIX5Q8N196 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.61■□□□□ 0.73
SIX5Q8N196 AL121672.3-201ENST00000608644 468 ntBASIC19.61■□□□□ 0.73
SIX5Q8N196 AC006538.3-201ENST00000612495 578 ntBASIC19.61■□□□□ 0.73
SIX5Q8N196 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.61■□□□□ 0.73
SIX5Q8N196 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.61■□□□□ 0.73
SIX5Q8N196 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.6■□□□□ 0.73
SIX5Q8N196 AC007225.1-201ENST00000566331 1836 ntBASIC19.6■□□□□ 0.73
SIX5Q8N196 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.6■□□□□ 0.73
SIX5Q8N196 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIX5Q8N196 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIX5Q8N196 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SIX5Q8N196 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIX5Q8N196 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.6■□□□□ 0.73
SIX5Q8N196 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
SIX5Q8N196 AC092597.1-201ENST00000487352 616 ntBASIC19.6■□□□□ 0.73
SIX5Q8N196 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.6■□□□□ 0.73
SIX5Q8N196 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.6■□□□□ 0.73
SIX5Q8N196 AC011498.5-201ENST00000592027 486 ntBASIC19.6■□□□□ 0.73
SIX5Q8N196 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIX5Q8N196 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.6■□□□□ 0.73
SIX5Q8N196 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIX5Q8N196 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SIX5Q8N196 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.6■□□□□ 0.73
SIX5Q8N196 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIX5Q8N196 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIX5Q8N196 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIX5Q8N196 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIX5Q8N196 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.59■□□□□ 0.73
SIX5Q8N196 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms