Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 AL162377.1-201ENST00000618844 1793 ntBASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS3Q8IXF0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 SPDYE15P-201ENST00000424157 909 ntBASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.87■□□□□ 0.77
NPAS3Q8IXF0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 CLEC4GP1-201ENST00000596555 870 ntBASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS3Q8IXF0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 LINC01311-201ENST00000565162 1445 ntBASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 AL450487.1-201ENST00000426799 995 ntBASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.85■□□□□ 0.77
NPAS3Q8IXF0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 AL157384.1-201ENST00000445995 2473 ntBASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.84■□□□□ 0.77
NPAS3Q8IXF0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms