Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 AC022306.2-201ENST00000617563 647 ntBASIC22.04■■□□□ 1.12
PPP4R3CPQ6ZMV5 AL691403.2-201ENST00000618460 490 ntBASIC22.04■■□□□ 1.12
PPP4R3CPQ6ZMV5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
PPP4R3CPQ6ZMV5 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC22.04■■□□□ 1.12
PPP4R3CPQ6ZMV5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.04■■□□□ 1.12
PPP4R3CPQ6ZMV5 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PPP4R3CPQ6ZMV5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.04■■□□□ 1.12
PPP4R3CPQ6ZMV5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PPP4R3CPQ6ZMV5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 GCNT7-202ENST00000617620 1355 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 RNU6-1176P-201ENST00000390955 107 ntBASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 PPIL3-202ENST00000392283 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 AC011632.1-203ENST00000522914 454 ntTSL 3 BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 AL031963.3-201ENST00000606441 850 ntBASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 AC084781.1-201ENST00000613737 656 ntBASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PPP4R3CPQ6ZMV5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 AF228730.1-201ENST00000397972 663 ntBASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 RFC3P1-201ENST00000454568 682 ntBASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 AC097493.2-201ENST00000468675 780 ntBASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 RPS3AP15-201ENST00000483874 781 ntBASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 AC105233.1-201ENST00000498840 781 ntBASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 AC106868.1-201ENST00000505272 992 ntBASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 RN7SL471P-201ENST00000580476 299 ntBASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 AC108673.3-201ENST00000609183 335 ntBASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 AC022960.3-201ENST00000619794 441 ntBASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 KRT8P17-201ENST00000453110 1448 ntBASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PPP4R3CPQ6ZMV5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PPP4R3CPQ6ZMV5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.11
PPP4R3CPQ6ZMV5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 KRT8P20-201ENST00000423953 1409 ntBASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 AL050305.1-201ENST00000399993 1230 ntBASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 MTND3P20-201ENST00000407663 186 ntBASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 AC131902.1-201ENST00000521558 594 ntTSL 3 BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 AC069208.1-206ENST00000538905 832 ntTSL 4 BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 TRAV11-201ENST00000539512 339 ntBASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 AC087888.1-201ENST00000550884 1254 ntBASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 AC243964.3-201ENST00000623022 2028 ntBASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PPP4R3CPQ6ZMV5 AC096656.1-201ENST00000623826 1364 ntBASIC22■■□□□ 1.11
PPP4R3CPQ6ZMV5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
PPP4R3CPQ6ZMV5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PPP4R3CPQ6ZMV5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
PPP4R3CPQ6ZMV5 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
PPP4R3CPQ6ZMV5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms