Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.73■□□□□ 0.43
H3F3CQ6NXT2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H3F3CQ6NXT2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
H3F3CQ6NXT2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H3F3CQ6NXT2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.73■□□□□ 0.43
H3F3CQ6NXT2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
H3F3CQ6NXT2 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H3F3CQ6NXT2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H3F3CQ6NXT2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.73■□□□□ 0.43
H3F3CQ6NXT2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.73■□□□□ 0.43
H3F3CQ6NXT2 KRT18P57-201ENST00000443599 1254 ntBASIC17.73■□□□□ 0.43
H3F3CQ6NXT2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.73■□□□□ 0.43
H3F3CQ6NXT2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
H3F3CQ6NXT2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.73■□□□□ 0.43
H3F3CQ6NXT2 AL353719.1-201ENST00000566847 864 ntBASIC17.73■□□□□ 0.43
H3F3CQ6NXT2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.73■□□□□ 0.43
H3F3CQ6NXT2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.73■□□□□ 0.43
H3F3CQ6NXT2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.73■□□□□ 0.43
H3F3CQ6NXT2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.73■□□□□ 0.43
H3F3CQ6NXT2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H3F3CQ6NXT2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 KRT8P11-201ENST00000409686 1436 ntBASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 ZNF815P-204ENST00000434898 1737 ntBASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 LIN28AP1-201ENST00000429574 405 ntBASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
H3F3CQ6NXT2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 AC104076.2-201ENST00000448912 469 ntBASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 AL049597.2-201ENST00000565575 961 ntBASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
H3F3CQ6NXT2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
H3F3CQ6NXT2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
H3F3CQ6NXT2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 AL590326.2-201ENST00000625139 305 ntBASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H3F3CQ6NXT2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms