Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 ZNF259P1-201ENST00000407656 1365 ntBASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 RPSAP43-201ENST00000402237 625 ntBASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 AC093909.1-201ENST00000504731 1122 ntBASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST2H2BCQ6DN03 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 IGHV3-47-201ENST00000425060 335 ntBASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 AF186996.4-201ENST00000467186 377 ntBASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 AC036111.1-201ENST00000533973 1582 ntBASIC16.43■□□□□ 0.22
HIST2H2BCQ6DN03 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 AC112482.1-201ENST00000492080 688 ntBASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2BCQ6DN03 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2BCQ6DN03 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2BCQ6DN03 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2BCQ6DN03 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2BCQ6DN03 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HIST2H2BCQ6DN03 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2BCQ6DN03 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.41■□□□□ 0.22
HIST2H2BCQ6DN03 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.41■□□□□ 0.22
HIST2H2BCQ6DN03 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2BCQ6DN03 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2BCQ6DN03 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2BCQ6DN03 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.41■□□□□ 0.22
HIST2H2BCQ6DN03 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.41■□□□□ 0.22
HIST2H2BCQ6DN03 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST2H2BCQ6DN03 GPX1P2-201ENST00000429271 606 ntBASIC16.41■□□□□ 0.22
HIST2H2BCQ6DN03 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.41■□□□□ 0.22
HIST2H2BCQ6DN03 SCARNA2-201ENST00000458748 420 ntBASIC16.41■□□□□ 0.22
HIST2H2BCQ6DN03 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HIST2H2BCQ6DN03 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST2H2BCQ6DN03 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2BCQ6DN03 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms