Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.82■■□□□ 1.08
LONRF3Q496Y0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LONRF3Q496Y0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
LONRF3Q496Y0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.82■■□□□ 1.08
LONRF3Q496Y0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LONRF3Q496Y0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
LONRF3Q496Y0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.82■■□□□ 1.08
LONRF3Q496Y0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LONRF3Q496Y0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LONRF3Q496Y0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LONRF3Q496Y0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
LONRF3Q496Y0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
LONRF3Q496Y0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LONRF3Q496Y0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LONRF3Q496Y0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LONRF3Q496Y0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
LONRF3Q496Y0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
LONRF3Q496Y0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
LONRF3Q496Y0 YBX1P10-201ENST00000444752 975 ntBASIC21.81■■□□□ 1.08
LONRF3Q496Y0 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.81■■□□□ 1.08
LONRF3Q496Y0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LONRF3Q496Y0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
LONRF3Q496Y0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
LONRF3Q496Y0 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.81■■□□□ 1.08
LONRF3Q496Y0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
LONRF3Q496Y0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 KRT8P8-201ENST00000434750 1448 ntBASIC21.8■■□□□ 1.08
LONRF3Q496Y0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LONRF3Q496Y0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 CROCCP3-202ENST00000420820 1947 ntBASIC21.79■■□□□ 1.08
LONRF3Q496Y0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 PRKY-204ENST00000533551 1019 ntBASIC21.79■■□□□ 1.08
LONRF3Q496Y0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LONRF3Q496Y0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
LONRF3Q496Y0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LONRF3Q496Y0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LONRF3Q496Y0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LONRF3Q496Y0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
LONRF3Q496Y0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LONRF3Q496Y0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
LONRF3Q496Y0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
LONRF3Q496Y0 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.78■■□□□ 1.08
LONRF3Q496Y0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.78■■□□□ 1.08
LONRF3Q496Y0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.78■■□□□ 1.08
LONRF3Q496Y0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.78■■□□□ 1.08
LONRF3Q496Y0 AL121829.2-201ENST00000620908 328 ntBASIC21.78■■□□□ 1.08
LONRF3Q496Y0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.78■■□□□ 1.08
LONRF3Q496Y0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LONRF3Q496Y0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.78■■□□□ 1.08
LONRF3Q496Y0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LONRF3Q496Y0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LONRF3Q496Y0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
LONRF3Q496Y0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.78■■□□□ 1.08
LONRF3Q496Y0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.78■■□□□ 1.08
LONRF3Q496Y0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
LONRF3Q496Y0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms