Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFX7Q2KHR2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFX7Q2KHR2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFX7Q2KHR2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RFX7Q2KHR2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
RFX7Q2KHR2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFX7Q2KHR2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
RFX7Q2KHR2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
RFX7Q2KHR2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.24■■□□□ 1.31
RFX7Q2KHR2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFX7Q2KHR2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
RFX7Q2KHR2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC23.24■■□□□ 1.31
RFX7Q2KHR2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFX7Q2KHR2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC23.24■■□□□ 1.31
RFX7Q2KHR2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
RFX7Q2KHR2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RFX7Q2KHR2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFX7Q2KHR2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.24■■□□□ 1.31
RFX7Q2KHR2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFX7Q2KHR2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC23.24■■□□□ 1.31
RFX7Q2KHR2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFX7Q2KHR2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC23.23■■□□□ 1.31
RFX7Q2KHR2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
RFX7Q2KHR2 AC007952.6-201ENST00000573168 2673 ntBASIC23.23■■□□□ 1.31
RFX7Q2KHR2 AC003957.1-201ENST00000625108 2673 ntBASIC23.23■■□□□ 1.31
RFX7Q2KHR2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.23■■□□□ 1.31
RFX7Q2KHR2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFX7Q2KHR2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC23.23■■□□□ 1.31
RFX7Q2KHR2 AC004951.3-201ENST00000418645 1148 ntBASIC23.23■■□□□ 1.31
RFX7Q2KHR2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC23.23■■□□□ 1.31
RFX7Q2KHR2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC23.23■■□□□ 1.31
RFX7Q2KHR2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
RFX7Q2KHR2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC23.23■■□□□ 1.31
RFX7Q2KHR2 NME3-204ENST00000563498 920 ntTSL 2 BASIC23.23■■□□□ 1.31
RFX7Q2KHR2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFX7Q2KHR2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFX7Q2KHR2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFX7Q2KHR2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC23.23■■□□□ 1.31
RFX7Q2KHR2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.22■■□□□ 1.31
RFX7Q2KHR2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC23.22■■□□□ 1.31
RFX7Q2KHR2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC23.22■■□□□ 1.31
RFX7Q2KHR2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
RFX7Q2KHR2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFX7Q2KHR2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFX7Q2KHR2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RFX7Q2KHR2 CRYGFP-201ENST00000418459 633 ntBASIC23.22■■□□□ 1.31
RFX7Q2KHR2 AL137013.1-201ENST00000432946 1228 ntBASIC23.22■■□□□ 1.31
RFX7Q2KHR2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC23.22■■□□□ 1.31
RFX7Q2KHR2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC23.22■■□□□ 1.31
RFX7Q2KHR2 AL049597.2-201ENST00000565575 961 ntBASIC23.22■■□□□ 1.31
RFX7Q2KHR2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC23.22■■□□□ 1.31
RFX7Q2KHR2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.22■■□□□ 1.31
RFX7Q2KHR2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFX7Q2KHR2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC23.22■■□□□ 1.31
RFX7Q2KHR2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFX7Q2KHR2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.22■■□□□ 1.31
RFX7Q2KHR2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFX7Q2KHR2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
RFX7Q2KHR2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 ECEL1P2-202ENST00000465689 757 ntBASIC23.21■■□□□ 1.31
RFX7Q2KHR2 AC091390.4-202ENST00000476426 537 ntBASIC23.21■■□□□ 1.31
RFX7Q2KHR2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFX7Q2KHR2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.31
RFX7Q2KHR2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
RFX7Q2KHR2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFX7Q2KHR2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFX7Q2KHR2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFX7Q2KHR2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFX7Q2KHR2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFX7Q2KHR2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.2■■□□□ 1.3
RFX7Q2KHR2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RFX7Q2KHR2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RFX7Q2KHR2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC23.2■■□□□ 1.3
RFX7Q2KHR2 TSPY23P-201ENST00000440136 739 ntBASIC23.2■■□□□ 1.3
RFX7Q2KHR2 MFAP1P1-201ENST00000442257 1255 ntBASIC23.2■■□□□ 1.3
RFX7Q2KHR2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC23.2■■□□□ 1.3
RFX7Q2KHR2 DUX4L26-201ENST00000489078 1255 ntBASIC23.2■■□□□ 1.3
RFX7Q2KHR2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
RFX7Q2KHR2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC23.2■■□□□ 1.3
RFX7Q2KHR2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms