Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3EP60228 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
EIF3EP60228 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.81■□□□□ 0.76
EIF3EP60228 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.8■□□□□ 0.76
EIF3EP60228 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.8■□□□□ 0.76
EIF3EP60228 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
EIF3EP60228 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3EP60228 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
EIF3EP60228 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3EP60228 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3EP60228 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3EP60228 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3EP60228 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.8■□□□□ 0.76
EIF3EP60228 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3EP60228 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.8■□□□□ 0.76
EIF3EP60228 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3EP60228 FP475955.4-201ENST00000623131 1990 ntBASIC19.8■□□□□ 0.76
EIF3EP60228 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3EP60228 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3EP60228 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
EIF3EP60228 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
EIF3EP60228 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
EIF3EP60228 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.79■□□□□ 0.76
EIF3EP60228 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
EIF3EP60228 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.79■□□□□ 0.76
EIF3EP60228 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3EP60228 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.79■□□□□ 0.76
EIF3EP60228 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3EP60228 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3EP60228 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
EIF3EP60228 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3EP60228 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
EIF3EP60228 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
EIF3EP60228 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.79■□□□□ 0.76
EIF3EP60228 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
EIF3EP60228 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.79■□□□□ 0.76
EIF3EP60228 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3EP60228 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3EP60228 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.79■□□□□ 0.76
EIF3EP60228 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3EP60228 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3EP60228 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3EP60228 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3EP60228 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3EP60228 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3EP60228 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.79■□□□□ 0.76
EIF3EP60228 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3EP60228 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.79■□□□□ 0.76
EIF3EP60228 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
EIF3EP60228 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EIF3EP60228 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EIF3EP60228 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EIF3EP60228 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EIF3EP60228 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EIF3EP60228 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.78■□□□□ 0.76
EIF3EP60228 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EIF3EP60228 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
EIF3EP60228 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EIF3EP60228 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EIF3EP60228 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EIF3EP60228 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
EIF3EP60228 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EIF3EP60228 KRT17P3-201ENST00000420566 1262 ntBASIC19.78■□□□□ 0.76
EIF3EP60228 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.78■□□□□ 0.76
EIF3EP60228 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.78■□□□□ 0.76
EIF3EP60228 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.78■□□□□ 0.76
EIF3EP60228 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.78■□□□□ 0.76
EIF3EP60228 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EIF3EP60228 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
EIF3EP60228 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.78■□□□□ 0.76
EIF3EP60228 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
EIF3EP60228 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EIF3EP60228 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
EIF3EP60228 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.78■□□□□ 0.76
EIF3EP60228 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EIF3EP60228 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
EIF3EP60228 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
EIF3EP60228 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EIF3EP60228 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
EIF3EP60228 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.78■□□□□ 0.76
EIF3EP60228 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.78■□□□□ 0.76
EIF3EP60228 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.77■□□□□ 0.76
EIF3EP60228 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3EP60228 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
EIF3EP60228 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
EIF3EP60228 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3EP60228 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.77■□□□□ 0.76
EIF3EP60228 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3EP60228 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.77■□□□□ 0.76
EIF3EP60228 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3EP60228 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.77■□□□□ 0.76
EIF3EP60228 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
EIF3EP60228 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3EP60228 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3EP60228 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3EP60228 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.77■□□□□ 0.76
EIF3EP60228 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3EP60228 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.77■□□□□ 0.76
EIF3EP60228 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3EP60228 AC026366.1-201ENST00000488803 879 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms