Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
HIST1H2BDP58876 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.52□□□□□ -0.09
HIST1H2BDP58876 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 MIR6722-201ENST00000617286 78 ntBASIC14.51□□□□□ -0.09
HIST1H2BDP58876 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HIST1H2BDP58876 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HIST1H2BDP58876 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 ANO7L1-203ENST00000602586 1720 ntBASIC14.49□□□□□ -0.09
HIST1H2BDP58876 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.49□□□□□ -0.09
HIST1H2BDP58876 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HIST1H2BDP58876 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H2BDP58876 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H2BDP58876 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HIST1H2BDP58876 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
HIST1H2BDP58876 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
HIST1H2BDP58876 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.48□□□□□ -0.09
HIST1H2BDP58876 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.48□□□□□ -0.09
HIST1H2BDP58876 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
HIST1H2BDP58876 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms