Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.21■□□□□ 0.83
CLCN4P51793 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.21■□□□□ 0.83
CLCN4P51793 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN4P51793 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN4P51793 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN4P51793 AC092667.1-201ENST00000434301 2586 ntBASIC20.2■□□□□ 0.82
CLCN4P51793 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.2■□□□□ 0.82
CLCN4P51793 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.2■□□□□ 0.82
CLCN4P51793 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CLCN4P51793 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN4P51793 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.2■□□□□ 0.82
CLCN4P51793 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.2■□□□□ 0.82
CLCN4P51793 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.2■□□□□ 0.82
CLCN4P51793 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.2■□□□□ 0.82
CLCN4P51793 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
CLCN4P51793 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
CLCN4P51793 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.2■□□□□ 0.82
CLCN4P51793 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCN4P51793 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.2■□□□□ 0.82
CLCN4P51793 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.2■□□□□ 0.82
CLCN4P51793 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
CLCN4P51793 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN4P51793 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
CLCN4P51793 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.19■□□□□ 0.82
CLCN4P51793 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.19■□□□□ 0.82
CLCN4P51793 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN4P51793 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN4P51793 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CLCN4P51793 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN4P51793 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN4P51793 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN4P51793 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.19■□□□□ 0.82
CLCN4P51793 MIR4674-201ENST00000582457 87 ntBASIC20.19■□□□□ 0.82
CLCN4P51793 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN4P51793 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.19■□□□□ 0.82
CLCN4P51793 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN4P51793 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN4P51793 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.19■□□□□ 0.82
CLCN4P51793 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN4P51793 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN4P51793 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLCN4P51793 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.18■□□□□ 0.82
CLCN4P51793 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN4P51793 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.18■□□□□ 0.82
CLCN4P51793 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN4P51793 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN4P51793 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CLCN4P51793 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CLCN4P51793 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.18■□□□□ 0.82
CLCN4P51793 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN4P51793 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.18■□□□□ 0.82
CLCN4P51793 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN4P51793 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN4P51793 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.18■□□□□ 0.82
CLCN4P51793 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN4P51793 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.18■□□□□ 0.82
CLCN4P51793 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.18■□□□□ 0.82
CLCN4P51793 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.18■□□□□ 0.82
CLCN4P51793 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.18■□□□□ 0.82
CLCN4P51793 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.18■□□□□ 0.82
CLCN4P51793 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.18■□□□□ 0.82
CLCN4P51793 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.18■□□□□ 0.82
CLCN4P51793 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.18■□□□□ 0.82
CLCN4P51793 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.18■□□□□ 0.82
CLCN4P51793 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN4P51793 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN4P51793 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN4P51793 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.18■□□□□ 0.82
CLCN4P51793 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN4P51793 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CLCN4P51793 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN4P51793 AL162377.1-201ENST00000618844 1793 ntBASIC20.18■□□□□ 0.82
CLCN4P51793 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN4P51793 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN4P51793 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN4P51793 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CLCN4P51793 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.18■□□□□ 0.82
CLCN4P51793 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN4P51793 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN4P51793 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLCN4P51793 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN4P51793 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN4P51793 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN4P51793 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN4P51793 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.17■□□□□ 0.82
CLCN4P51793 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN4P51793 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN4P51793 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN4P51793 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN4P51793 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN4P51793 SPDYE15P-201ENST00000424157 909 ntBASIC20.17■□□□□ 0.82
CLCN4P51793 AL450487.1-201ENST00000426799 995 ntBASIC20.17■□□□□ 0.82
CLCN4P51793 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CLCN4P51793 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CLCN4P51793 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.17■□□□□ 0.82
CLCN4P51793 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN4P51793 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN4P51793 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN4P51793 LINC01311-201ENST00000565162 1445 ntBASIC20.17■□□□□ 0.82
CLCN4P51793 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms