Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK7P50613 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.21■□□□□ 0.99
CDK7P50613 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK7P50613 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDK7P50613 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CDK7P50613 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK7P50613 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CDK7P50613 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.2■□□□□ 0.98
CDK7P50613 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK7P50613 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDK7P50613 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.2■□□□□ 0.98
CDK7P50613 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
CDK7P50613 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK7P50613 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDK7P50613 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK7P50613 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.2■□□□□ 0.98
CDK7P50613 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDK7P50613 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK7P50613 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.2■□□□□ 0.98
CDK7P50613 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.2■□□□□ 0.98
CDK7P50613 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.2■□□□□ 0.98
CDK7P50613 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK7P50613 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDK7P50613 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.19■□□□□ 0.98
CDK7P50613 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDK7P50613 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
CDK7P50613 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.19■□□□□ 0.98
CDK7P50613 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.19■□□□□ 0.98
CDK7P50613 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CDK7P50613 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDK7P50613 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.19■□□□□ 0.98
CDK7P50613 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.19■□□□□ 0.98
CDK7P50613 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.19■□□□□ 0.98
CDK7P50613 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CDK7P50613 FDX1P1-201ENST00000449115 551 ntBASIC21.19■□□□□ 0.98
CDK7P50613 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.19■□□□□ 0.98
CDK7P50613 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.19■□□□□ 0.98
CDK7P50613 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CDK7P50613 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CDK7P50613 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.19■□□□□ 0.98
CDK7P50613 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.19■□□□□ 0.98
CDK7P50613 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.19■□□□□ 0.98
CDK7P50613 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDK7P50613 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDK7P50613 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.18■□□□□ 0.98
CDK7P50613 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDK7P50613 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.18■□□□□ 0.98
CDK7P50613 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.18■□□□□ 0.98
CDK7P50613 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDK7P50613 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CDK7P50613 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDK7P50613 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDK7P50613 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDK7P50613 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.18■□□□□ 0.98
CDK7P50613 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.18■□□□□ 0.98
CDK7P50613 MIR3652-201ENST00000579335 131 ntBASIC21.18■□□□□ 0.98
CDK7P50613 RN7SL510P-201ENST00000581311 263 ntBASIC21.18■□□□□ 0.98
CDK7P50613 CR769767.2-201ENST00000622735 460 ntBASIC21.18■□□□□ 0.98
CDK7P50613 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDK7P50613 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDK7P50613 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CDK7P50613 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CDK7P50613 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CDK7P50613 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDK7P50613 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDK7P50613 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.17■□□□□ 0.98
CDK7P50613 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.17■□□□□ 0.98
CDK7P50613 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDK7P50613 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDK7P50613 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDK7P50613 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.17■□□□□ 0.98
CDK7P50613 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.17■□□□□ 0.98
CDK7P50613 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.17■□□□□ 0.98
CDK7P50613 AC092597.1-201ENST00000487352 616 ntBASIC21.17■□□□□ 0.98
CDK7P50613 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.17■□□□□ 0.98
CDK7P50613 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.17■□□□□ 0.98
CDK7P50613 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDK7P50613 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.17■□□□□ 0.98
CDK7P50613 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDK7P50613 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
CDK7P50613 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.17■□□□□ 0.98
CDK7P50613 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CDK7P50613 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDK7P50613 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CDK7P50613 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDK7P50613 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CDK7P50613 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDK7P50613 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CDK7P50613 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDK7P50613 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CDK7P50613 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.16■□□□□ 0.98
CDK7P50613 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDK7P50613 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDK7P50613 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDK7P50613 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CDK7P50613 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.16■□□□□ 0.98
CDK7P50613 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDK7P50613 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDK7P50613 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.16■□□□□ 0.98
CDK7P50613 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms