Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
MTHFRP42898 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MTHFRP42898 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
MTHFRP42898 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MTHFRP42898 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MTHFRP42898 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MTHFRP42898 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
MTHFRP42898 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.08■□□□□ 0.81
MTHFRP42898 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.08■□□□□ 0.81
MTHFRP42898 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MTHFRP42898 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.08■□□□□ 0.81
MTHFRP42898 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.08■□□□□ 0.81
MTHFRP42898 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
MTHFRP42898 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.08■□□□□ 0.8
MTHFRP42898 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MTHFRP42898 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MTHFRP42898 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MTHFRP42898 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MTHFRP42898 BX119927.1-201ENST00000636596 1552 ntBASIC20.08■□□□□ 0.8
MTHFRP42898 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MTHFRP42898 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.08■□□□□ 0.8
MTHFRP42898 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MTHFRP42898 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MTHFRP42898 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
MTHFRP42898 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.07■□□□□ 0.8
MTHFRP42898 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MTHFRP42898 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MTHFRP42898 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.07■□□□□ 0.8
MTHFRP42898 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
MTHFRP42898 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MTHFRP42898 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MTHFRP42898 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.07■□□□□ 0.8
MTHFRP42898 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MTHFRP42898 LINC01465-201ENST00000408887 1940 ntBASIC20.07■□□□□ 0.8
MTHFRP42898 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MTHFRP42898 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
MTHFRP42898 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MTHFRP42898 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.07■□□□□ 0.8
MTHFRP42898 SMG8-203ENST00000578922 2178 ntBASIC20.07■□□□□ 0.8
MTHFRP42898 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.07■□□□□ 0.8
MTHFRP42898 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.07■□□□□ 0.8
MTHFRP42898 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MTHFRP42898 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
MTHFRP42898 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MTHFRP42898 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
MTHFRP42898 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MTHFRP42898 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MTHFRP42898 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MTHFRP42898 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MTHFRP42898 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.06■□□□□ 0.8
MTHFRP42898 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
MTHFRP42898 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MTHFRP42898 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
MTHFRP42898 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MTHFRP42898 AC092667.1-201ENST00000434301 2586 ntBASIC20.06■□□□□ 0.8
MTHFRP42898 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MTHFRP42898 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MTHFRP42898 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.06■□□□□ 0.8
MTHFRP42898 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MTHFRP42898 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.05■□□□□ 0.8
MTHFRP42898 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MTHFRP42898 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MTHFRP42898 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.05■□□□□ 0.8
MTHFRP42898 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MTHFRP42898 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.05■□□□□ 0.8
MTHFRP42898 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
MTHFRP42898 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MTHFRP42898 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MTHFRP42898 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.05■□□□□ 0.8
MTHFRP42898 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MTHFRP42898 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.05■□□□□ 0.8
MTHFRP42898 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.05■□□□□ 0.8
MTHFRP42898 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.05■□□□□ 0.8
MTHFRP42898 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.05■□□□□ 0.8
MTHFRP42898 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.05■□□□□ 0.8
MTHFRP42898 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MTHFRP42898 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MTHFRP42898 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.05■□□□□ 0.8
MTHFRP42898 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MTHFRP42898 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MTHFRP42898 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.04■□□□□ 0.8
MTHFRP42898 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MTHFRP42898 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
MTHFRP42898 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MTHFRP42898 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MTHFRP42898 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MTHFRP42898 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MTHFRP42898 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
MTHFRP42898 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
MTHFRP42898 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.04■□□□□ 0.8
MTHFRP42898 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MTHFRP42898 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.04■□□□□ 0.8
MTHFRP42898 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.04■□□□□ 0.8
MTHFRP42898 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MTHFRP42898 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.04■□□□□ 0.8
MTHFRP42898 MIR3652-201ENST00000579335 131 ntBASIC20.04■□□□□ 0.8
MTHFRP42898 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.04■□□□□ 0.8
MTHFRP42898 NPAP1P7-201ENST00000613027 823 ntBASIC20.04■□□□□ 0.8
MTHFRP42898 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.04■□□□□ 0.8
MTHFRP42898 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms