Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTR1EP28566 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTR1EP28566 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTR1EP28566 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTR1EP28566 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR1EP28566 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HTR1EP28566 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR1EP28566 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR1EP28566 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR1EP28566 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.37■□□□□ 0.53
HTR1EP28566 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.37■□□□□ 0.53
HTR1EP28566 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HTR1EP28566 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR1EP28566 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HTR1EP28566 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.37■□□□□ 0.53
HTR1EP28566 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HTR1EP28566 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR1EP28566 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR1EP28566 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
HTR1EP28566 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HTR1EP28566 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.37■□□□□ 0.53
HTR1EP28566 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.37■□□□□ 0.53
HTR1EP28566 CYP2T3P-201ENST00000601990 817 ntBASIC18.37■□□□□ 0.53
HTR1EP28566 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.37■□□□□ 0.53
HTR1EP28566 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
HTR1EP28566 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR1EP28566 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR1EP28566 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HTR1EP28566 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HTR1EP28566 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR1EP28566 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR1EP28566 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HTR1EP28566 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR1EP28566 AC104581.1-202ENST00000635932 2618 ntBASIC18.36■□□□□ 0.53
HTR1EP28566 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HTR1EP28566 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HTR1EP28566 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
HTR1EP28566 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HTR1EP28566 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HTR1EP28566 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HTR1EP28566 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HTR1EP28566 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HTR1EP28566 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
HTR1EP28566 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HTR1EP28566 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HTR1EP28566 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.36■□□□□ 0.53
HTR1EP28566 SNORA78-201ENST00000459373 127 ntBASIC18.36■□□□□ 0.53
HTR1EP28566 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.36■□□□□ 0.53
HTR1EP28566 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.36■□□□□ 0.53
HTR1EP28566 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.36■□□□□ 0.53
HTR1EP28566 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
HTR1EP28566 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HTR1EP28566 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.36■□□□□ 0.53
HTR1EP28566 AL031598.1-201ENST00000561511 1773 ntBASIC18.36■□□□□ 0.53
HTR1EP28566 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HTR1EP28566 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.36■□□□□ 0.53
HTR1EP28566 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.36■□□□□ 0.53
HTR1EP28566 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.36■□□□□ 0.53
HTR1EP28566 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.36■□□□□ 0.53
HTR1EP28566 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HTR1EP28566 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
HTR1EP28566 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.36■□□□□ 0.53
HTR1EP28566 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HTR1EP28566 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HTR1EP28566 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HTR1EP28566 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HTR1EP28566 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HTR1EP28566 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HTR1EP28566 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HTR1EP28566 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HTR1EP28566 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.35■□□□□ 0.53
HTR1EP28566 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HTR1EP28566 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HTR1EP28566 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HTR1EP28566 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HTR1EP28566 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.35■□□□□ 0.53
HTR1EP28566 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HTR1EP28566 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HTR1EP28566 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.35■□□□□ 0.53
HTR1EP28566 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
HTR1EP28566 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.35■□□□□ 0.53
HTR1EP28566 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.35■□□□□ 0.53
HTR1EP28566 Z99916.2-201ENST00000604037 246 ntBASIC18.35■□□□□ 0.53
HTR1EP28566 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HTR1EP28566 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.35■□□□□ 0.53
HTR1EP28566 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.35■□□□□ 0.53
HTR1EP28566 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
HTR1EP28566 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.35■□□□□ 0.53
HTR1EP28566 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HTR1EP28566 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HTR1EP28566 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HTR1EP28566 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.35■□□□□ 0.53
HTR1EP28566 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.35■□□□□ 0.53
HTR1EP28566 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
HTR1EP28566 AC093525.10-201ENST00000625130 1569 ntBASIC18.34■□□□□ 0.53
HTR1EP28566 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HTR1EP28566 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.34■□□□□ 0.53
HTR1EP28566 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HTR1EP28566 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
HTR1EP28566 AC135050.7-201ENST00000624508 2218 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms