Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC016734.2-201ENST00000624325 1377 ntBASIC19.4■□□□□ 0.7
COL4A2P08572 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.4■□□□□ 0.7
COL4A2P08572 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
COL4A2P08572 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
COL4A2P08572 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.39■□□□□ 0.7
COL4A2P08572 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.39■□□□□ 0.7
COL4A2P08572 MIR3652-201ENST00000579335 131 ntBASIC19.39■□□□□ 0.7
COL4A2P08572 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.39■□□□□ 0.7
COL4A2P08572 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.39■□□□□ 0.7
COL4A2P08572 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL4A2P08572 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A2P08572 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.39■□□□□ 0.69
COL4A2P08572 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A2P08572 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.39■□□□□ 0.69
COL4A2P08572 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.39■□□□□ 0.69
COL4A2P08572 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.39■□□□□ 0.69
COL4A2P08572 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.39■□□□□ 0.69
COL4A2P08572 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
COL4A2P08572 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.39■□□□□ 0.69
COL4A2P08572 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A2P08572 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.39■□□□□ 0.69
COL4A2P08572 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.39■□□□□ 0.69
COL4A2P08572 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A2P08572 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A2P08572 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A2P08572 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A2P08572 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A2P08572 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A2P08572 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A2P08572 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.38■□□□□ 0.69
COL4A2P08572 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A2P08572 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.38■□□□□ 0.69
COL4A2P08572 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL4A2P08572 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A2P08572 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.37■□□□□ 0.69
COL4A2P08572 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.37■□□□□ 0.69
COL4A2P08572 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
COL4A2P08572 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.37■□□□□ 0.69
COL4A2P08572 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.37■□□□□ 0.69
COL4A2P08572 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COL4A2P08572 AC079602.3-201ENST00000623931 403 ntBASIC19.37■□□□□ 0.69
COL4A2P08572 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A2P08572 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A2P08572 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.37■□□□□ 0.69
COL4A2P08572 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A2P08572 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A2P08572 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A2P08572 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.37■□□□□ 0.69
COL4A2P08572 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A2P08572 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A2P08572 GABARAPL3-202ENST00000624044 1851 ntBASIC19.37■□□□□ 0.69
COL4A2P08572 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A2P08572 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL4A2P08572 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.37■□□□□ 0.69
COL4A2P08572 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.37■□□□□ 0.69
COL4A2P08572 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.37■□□□□ 0.69
COL4A2P08572 AL121672.3-201ENST00000608644 468 ntBASIC19.37■□□□□ 0.69
COL4A2P08572 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.36■□□□□ 0.69
COL4A2P08572 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.36■□□□□ 0.69
COL4A2P08572 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.36■□□□□ 0.69
COL4A2P08572 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A2P08572 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A2P08572 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.36■□□□□ 0.69
COL4A2P08572 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
COL4A2P08572 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A2P08572 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A2P08572 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A2P08572 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A2P08572 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A2P08572 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.36■□□□□ 0.69
COL4A2P08572 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.36■□□□□ 0.69
COL4A2P08572 CHCHD2P8-201ENST00000429873 447 ntBASIC19.36■□□□□ 0.69
COL4A2P08572 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.36■□□□□ 0.69
COL4A2P08572 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A2P08572 MIR3180-5-201ENST00000583743 153 ntBASIC19.36■□□□□ 0.69
COL4A2P08572 AL732292.2-201ENST00000609649 430 ntBASIC19.36■□□□□ 0.69
COL4A2P08572 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A2P08572 AL157888.1-201ENST00000631930 593 ntBASIC19.36■□□□□ 0.69
COL4A2P08572 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A2P08572 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.36■□□□□ 0.69
COL4A2P08572 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
COL4A2P08572 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
COL4A2P08572 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.36■□□□□ 0.69
COL4A2P08572 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A2P08572 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL4A2P08572 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.35■□□□□ 0.69
COL4A2P08572 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A2P08572 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A2P08572 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A2P08572 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A2P08572 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.35■□□□□ 0.69
COL4A2P08572 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL4A2P08572 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.35■□□□□ 0.69
COL4A2P08572 KRT17P6-201ENST00000453795 1220 ntBASIC19.35■□□□□ 0.69
COL4A2P08572 BX276092.5-203ENST00000456199 560 ntBASIC19.35■□□□□ 0.69
COL4A2P08572 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.35■□□□□ 0.69
COL4A2P08572 AC092329.2-201ENST00000598402 547 ntBASIC19.35■□□□□ 0.69
COL4A2P08572 AL031008.1-201ENST00000619963 541 ntBASIC19.35■□□□□ 0.69
COL4A2P08572 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.35■□□□□ 0.69
COL4A2P08572 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms